Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

 Score =  593 bits (1529), Expect = e-174
 Identities = 290/555 (52%), Positives = 393/555 (70%), Gaps = 7/555 (1%)

Query: 5   WLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAY 64
           W  + P  VP  I+   Y S+VE+FE++   +AD+PAF NMG  +++  LE  S AF A+
Sbjct: 6   WNDKRPAGVPNDIDMGVYRSVVEVFERACKTHADRPAFSNMGVTLSYSDLERHSAAFTAW 65

Query: 65  LQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARA 124
           LQ+   L+ GDR+A+ MPNLLQYP+A+FG LRAG+I VN NPLYT RE+ HQ  D+ ARA
Sbjct: 66  LQHHTDLQPGDRIAIQMPNLLQYPIAVFGALRAGLIVVNTNPLYTSREMRHQFQDSGARA 125

Query: 125 IVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGAI 184
           +V ++ F + +++++ +T ++H++   +G MLP  KG +V+  VK++K MVP Y LP AI
Sbjct: 126 LVYLNTFGHNVQEVLPDTAIEHLIEVRIGDMLPPLKGVLVNAAVKHLKKMVPDYSLPQAI 185

Query: 185 SMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKG---- 240
           S +  L  G R  +    +  + +A LQYTGGTTGVAKGA+LTH N+VAN+ Q +     
Sbjct: 186 SFKDVLRDGARHNHKPAPLELDHVAVLQYTGGTTGVAKGAMLTHGNLVANMQQVRANMQQ 245

Query: 241 --AYG-PVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQK 297
              +G P+++EG+E+++  LPLYH++A TVNC+  +  G  N+LITNPRDI GFVKELQ+
Sbjct: 246 LDEHGHPIIREGQEVMIAPLPLYHIYAFTVNCMCMVVTGNHNVLITNPRDINGFVKELQR 305

Query: 298 YPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGY 357
           + F+A  G+NTLF AL+ +  F ++DF  +K    GG A+  AVAERWK  TG  ++EGY
Sbjct: 306 WQFSAFLGLNTLFVALMAHPQFKKIDFSRLKGTNSGGTALVSAVAERWKSMTGCTVVEGY 365

Query: 358 GLTECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQG 417
           GLTE SP+V  NP+      G +GLPVP T V+++DD GN +P  + GEL V+GPQVM+G
Sbjct: 366 GLTETSPVVCANPHGEHSRLGTVGLPVPGTTVKVIDDEGNALPLGERGELCVKGPQVMKG 425

Query: 418 YWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVAL 477
           YWQRP+AT EVL+ EGWL TGDI   D+ G + IVDRKKD+I+VSGFNVYPNEIEDVV  
Sbjct: 426 YWQRPDATAEVLDEEGWLKTGDIAVIDEDGFVSIVDRKKDLIIVSGFNVYPNEIEDVVMA 485

Query: 478 HGKVLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDL 537
           H KV   AAIG A++ SGE VK++VV  DP+L +DE+ A+CR++ TGYK+P+   FRD L
Sbjct: 486 HPKVAACAAIGVADEKSGEAVKLFVVPSDPTLDQDELHAYCRENFTGYKMPRHYVFRDAL 545

Query: 538 PKTNVGKILRRVLRE 552
           P T VGKILRR LR+
Sbjct: 546 PMTPVGKILRRELRD 560