Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., long-chain fatty acid--CoA ligase from Rhodopseudomonas palustris CGA009

 Score =  227 bits (578), Expect = 1e-63
 Identities = 172/527 (32%), Positives = 262/527 (49%), Gaps = 46/527 (8%)

Query: 37  ADQPAFMNMGAVMTFRKLEERSRAFAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLR 96
           AD  A +      +  ++ +R    A+  +  L +  G+RVA++  N  +Y    F VL 
Sbjct: 15  ADDVALVTSERSFSHGEMLDRVARLASVFRR-LGVTGGERVAILAANGHEYIECYFAVLW 73

Query: 97  AGMIAVNVNPLYTPRELEHQLNDADARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQML 156
           AG + V +N  ++  E+  Q+ DA+   +V   +F ++  Q+    +     +T++    
Sbjct: 74  AGGVVVPINSRFSLAEMIEQVTDAEPIVLVSDRSFLDSALQLADACRG----ITAVVAAA 129

Query: 157 PRAKGTIVDFVVKYVKGMVPK-YDLPGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTG 215
           P A G             +PK YD   A++  K      R          +D+A L YTG
Sbjct: 130 PGAAG-------------LPKLYDYEAALADEKPCADAGR--------GNDDLACLFYTG 168

Query: 216 GTTGVAKGAILTHRNMVANVLQAKGAYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEM 275
           GTTG AKG +L+HRN+  N +    ++G    +   + + A PL+H+ A        I M
Sbjct: 169 GTTGRAKGVMLSHRNLWVNAVVTSLSFG---FDETTVALHAGPLFHLGAGARVYTTSI-M 224

Query: 276 GGRNLLITN--PRDIPGFVKELQKYPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGG 333
           GGR+++I    P+D+   +  +  +  T  T V T+   ++   D    D  ++KL   G
Sbjct: 225 GGRHVVIPRFAPKDV---LAAISHHKVTVATFVPTMLGMILQLPDLDSYDLSSLKLITYG 281

Query: 334 GMAVQRAVAERW-KKTTGVHLLEGYGLTECSPLVT------GNPYDLTDYTGAIGLPVPS 386
              +  AV +   ++   +   + YG+TE SP+ T        P        + G PV S
Sbjct: 282 ASPMPEAVLQECLRRFPSIRFGQSYGMTELSPVATILSPDDHLPSAPRHRLRSAGRPVVS 341

Query: 387 TEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQRPEATKEVLNAEGWLSTGDIVKFDDQ 446
            EVRIVD     +   +VGE+ VRGP VM GYW++PE T  VL   GW+ TGD  +FD +
Sbjct: 342 AEVRIVDAEDRQLKPGEVGEVVVRGPMVMMGYWKQPELTAHVLRG-GWMHTGDSGRFDTE 400

Query: 447 GLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLEVAAIGQANDVSGELVKIYVVKR- 505
           G ++I DR KDMI+  G NVY  E+E+ +A H  VL+ A IG  +   GE V   VV+R 
Sbjct: 401 GYLYISDRIKDMIITGGENVYSIEVENAIAAHPDVLQCAVIGVPHAKWGEAVHAVVVRRP 460

Query: 506 DPSLTKDEVIAHCRKHLTGYKVPKLVEFRDD-LPKTNVGKILRRVLR 551
             SLT DE+I  CR  +  YK P+ +EFRDD LP ++V KI +  LR
Sbjct: 461 GSSLTTDELITFCRSVIADYKSPRSIEFRDDPLPLSSVNKINKAALR 507