Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 571 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Sphingomonas koreensis DSMZ 15582

 Score =  272 bits (696), Expect = 2e-77
 Identities = 180/545 (33%), Positives = 276/545 (50%), Gaps = 18/545 (3%)

Query: 24  SLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAYLQNDLKLKKGDRVALMMPN 83
           S+   F+ S  +  + P    MG   ++ +  + +   A  L+  L    GDR+ L +PN
Sbjct: 31  SMAAAFDDSAQRMGNAPLLDFMGRHYSYAETLDGANRVACGLRA-LGYGPGDRIGLFLPN 89

Query: 84  LLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIVIVSNFA--NTLEQIVAN 141
           +  Y  A +G+L+ G   VN +PLY+  ELE Q+ D+  R +  +S  A   T  +++  
Sbjct: 90  VPHYVAAYYGILKLGATVVNFSPLYSVEELEAQVADSGTRLLFTISATALLPTALKVLEA 149

Query: 142 TQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGAISMRKALHKGRRLQYVKP 201
           + ++ +V+ S+   LP AK  +  +     K +  K D P  I+  K +           
Sbjct: 150 SSLERLVVGSVAGALPAAKSLLYRWFK--AKEVAEKPDDPRIIAFSKLIANDGACT-TAA 206

Query: 202 FMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYGPVLQEGRELVVTALPLYH 261
                 +A +QYTGGTTGV KGA+LTH+N+ AN  Q      P L   ++ V+  LP +H
Sbjct: 207 IDPETHLALIQYTGGTTGVPKGAMLTHQNLTANARQV-ARLDPELGTTKDKVLGVLPFFH 265

Query: 262 VFALTVNCLLFIEMGGRNLLITNPR-DIPGFVKELQKYPFTAITGVNTLFNALVNNEDFH 320
           VFA T      +  GG  +++  PR D    +  + +    A+ GV T+F AL+++ +  
Sbjct: 266 VFANTCVLNRTVITGGEIVML--PRFDAAQALAAITRTRPLALPGVPTMFQALLDHPNSA 323

Query: 321 ELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTECSPLVTGNPYDLTDYTGAI 380
             D+ ++K  + GG  +   +  R++  TG  L+EGYGL+E S +V+ NPY     +G I
Sbjct: 324 STDWSSLKYCISGGAPLPAELKTRFEAATGAKLIEGYGLSESSGVVSANPYVAEGKSGTI 383

Query: 381 GLPVPSTEVRIVD--DAGNVVPNDQVGELQVRGPQVMQGYWQRPEATKEVL----NAEGW 434
           G P+ +T VR+VD  D     P  + GE+ V GPQ+M GYW RPE            + W
Sbjct: 384 GQPIIATRVRLVDKEDPSKPAPEGEPGEIVVAGPQIMGGYWDRPETDDSTFCTDATGQKW 443

Query: 435 LSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLEVAAIGQANDVS 494
           L TGD+ + D+ G I IVDR KDMI V GF V+P  IEDV+  H  V E   +G  +   
Sbjct: 444 LRTGDVGQIDEDGFIKIVDRLKDMIAVGGFKVFPKHIEDVLYRHPAVKEALVVGMPDSYR 503

Query: 495 GELVKIYVVKRDPS--LTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKTNVGKILRRVLRE 552
           GE  + YV   D +  +T + +       L  ++    V  RD LPKT +GK+ R+ L  
Sbjct: 504 GETPRAYVALNDDADPVTGNALRDWLNPQLGKHERVDAVVIRDKLPKTMIGKLSRKDLLI 563

Query: 553 ENDAQ 557
           E  A+
Sbjct: 564 EIAAE 568