Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., long-chain-fatty-acid--CoA ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  350 bits (897), Expect = e-100
 Identities = 212/560 (37%), Positives = 311/560 (55%), Gaps = 12/560 (2%)

Query: 4   PWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAA 63
           PWL  Y KDVP  I+ +  P L    +++  ++  Q A +     +++ KL   +  FAA
Sbjct: 2   PWLQSYDKDVPARIDYEVAP-LFAFLDEAAERHPKQTAIIFRNYKVSYAKLRLLAERFAA 60

Query: 64  YLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADAR 123
            L+    L  GDRV++M+PN+ Q  +A +G+L+AG   V  NPLY  +EL HQ++D+ A 
Sbjct: 61  NLRAQGVLP-GDRVSVMLPNVPQAIIAFWGLLKAGCTVVMTNPLYMEKELVHQIHDSGAE 119

Query: 124 AIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPG- 182
            ++ +      +E +     ++   +T +   L      +  F  K  +G        G 
Sbjct: 120 YMIALDLVWPKIEPLRDRLGIRKFFITRISDALGFPLNLLYRFKAKR-EGTWRDVPFDGE 178

Query: 183 AISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAY 242
            +   K L K +     K     E +A LQYTGGTTG++KG +LTH N+  NV Q K   
Sbjct: 179 TVIPWKTLFKKKEGYSAKVENPREALALLQYTGGTTGISKGVMLTHYNLSVNVQQIKAIL 238

Query: 243 GPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKE-LQKYPFT 301
           G   +  R   +  +P +HV+ LT    L   +G    +I  PR +P  V   + K+  T
Sbjct: 239 GESTRM-RHTFLGLMPYFHVYGLTTCLTLPTALGAT--IIPFPRYVPRDVLVGIDKHKPT 295

Query: 302 AITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTE 361
              G  +++ +L+  +D  E D K++K  + G   +      R+ + TG  ++EG+GLTE
Sbjct: 296 IFPGAPSIYISLMQQKDVGEFDLKSIKYCISGSAPMPLEHIRRFHELTGAQVIEGFGLTE 355

Query: 362 CSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVD-DAGNV-VPNDQVGELQVRGPQVMQGYW 419
            SP+   NP       G+IG+P P TE R+VD + G V +P  ++GEL +RGPQVMQGY 
Sbjct: 356 ASPVTHLNPIHGVQKPGSIGVPFPDTEARVVDMEVGLVPLPPGKIGELIIRGPQVMQGYL 415

Query: 420 QRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHG 479
            RP+ T   L   GWL TGDI   D+ G   IVDRKKDMI+V G+NVYP EI++V+  H 
Sbjct: 416 NRPDETANTLR-NGWLYTGDIATMDEDGYFFIVDRKKDMIIVGGYNVYPREIDEVLHEHP 474

Query: 480 KVLEVAAIGQANDVSGELVKIYVVKRD-PSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLP 538
           KV E   +G  +   GE++K Y+V R+   LTK E++AHCR+ L  YKVPK VEFR++LP
Sbjct: 475 KVKEAVTVGVPHATRGEIIKAYIVPREGVKLTKAEIVAHCREQLANYKVPKQVEFRNELP 534

Query: 539 KTNVGKILRRVLREENDAQL 558
           KT VGK+LRR+LR E + +L
Sbjct: 535 KTIVGKVLRRILRAEEEERL 554