Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., AMP-binding protein from Ralstonia sp. UNC404CL21Col

 Score =  624 bits (1608), Expect = 0.0
 Identities = 321/568 (56%), Positives = 422/568 (74%), Gaps = 9/568 (1%)

Query: 2   DKPWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAF 61
           D+ WL  YP+ VP  INPD+Y SLVE+F +SV KY  + A++++G  MT+ + E +++ F
Sbjct: 12  DRIWLKSYPEGVPAEINPDRYHSLVEVFRESVEKYRTRVAYVSVGTEMTYGECERQAKQF 71

Query: 62  AAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDAD 121
           AA+LQ+   +KKGDRVA+M+PN LQYPV LFG L AG I VNVNPLYT  EL HQL D+ 
Sbjct: 72  AAWLQSR-GVKKGDRVAIMLPNSLQYPVCLFGTLLAGAIVVNVNPLYTVPELAHQLRDSG 130

Query: 122 ARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRA---KGTIVDFVVKYVKGMVPKY 178
           A+ IV++ NFA TLEQ +  +QV+++V+T +G ++  A   KG  ++FV+++V+  VP Y
Sbjct: 131 AQTIVVLENFARTLEQALPGSQVRNIVITGIGDLMGGALNLKGRALNFVMRHVQKQVPPY 190

Query: 179 DLPGAISMRKALHKG--RRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVL 236
            LP  + +R AL  G  R LQ V+  ++ EDIAFLQYTGGTTGVAKGA+LTHRN++AN+L
Sbjct: 191 KLPSPVWLRDALAAGGSRALQPVQ--LAPEDIAFLQYTGGTTGVAKGAMLTHRNIIANLL 248

Query: 237 QAKGAYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQ 296
           QA+     +L  G E  VT LPLYH+F+LTVN L+F+ +GGRN+LI NPRD    +  L+
Sbjct: 249 QAEEWSKSMLNGGVETNVTLLPLYHIFSLTVNLLMFMTLGGRNILIANPRDTKRVIFILR 308

Query: 297 KYPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEG 356
              F+ I GVNTLFNAL+ + DF + DF  MK+ +GGGMAVQRA+A+RWK+ TG  ++EG
Sbjct: 309 NERFSGIAGVNTLFNALLEDPDFAKRDFSAMKITIGGGMAVQRAIAQRWKEVTGHTIVEG 368

Query: 357 YGLTECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQ 416
           YGLTECSP+V+ NP  +T+++G IGLP PSTEVR   D G + P  + GELQVRGPQVM+
Sbjct: 369 YGLTECSPVVSMNPPHVTEFSGTIGLPAPSTEVRFKRDDGTIAPLGEPGELQVRGPQVMR 428

Query: 417 GYWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVA 476
           GYWQRP+ T + ++AEGW STGDI   D  G I ++DRKKDMILVSGFNVYPNEIEDVVA
Sbjct: 429 GYWQRPDETAKSIDAEGWFSTGDIGVMDANGYIRLIDRKKDMILVSGFNVYPNEIEDVVA 488

Query: 477 LHGKVLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFR-D 535
           LH +VLEVAAIG  + V+GE VKI VV R  +LT+  ++ HCR HLTGYK+P++VEFR +
Sbjct: 489 LHPEVLEVAAIGVPDPVAGERVKIIVVPRTGALTEAALLEHCRAHLTGYKMPRIVEFRHE 548

Query: 536 DLPKTNVGKILRRVLREENDAQLAAKAK 563
           +LPK+ VGKILRR LR+ +     A+A+
Sbjct: 549 ELPKSTVGKILRRELRDADPDIKRARAQ 576