Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., AMP-binding protein from Ralstonia sp. UNC404CL21Col

 Score =  211 bits (537), Expect = 6e-59
 Identities = 165/554 (29%), Positives = 266/554 (48%), Gaps = 40/554 (7%)

Query: 30  EQSVHKYA--------DQPAFMNMGAVMTFRKLEERSRAFAAYLQNDLKLKKGDRVALMM 81
           E  +H+Y         ++ A +  G  + +R+L++ S   A  L+  L + +GDRVAL +
Sbjct: 15  EMPLHRYCAHHAQQTPERIALLWYGRTICWRELDQASTRLAVQLRR-LGVTRGDRVALFL 73

Query: 82  PNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIVIVSNFANTLEQIVAN 141
            N  Q  VA     + G I V   PL    EL  QL D+ A+ +V  ++    +E     
Sbjct: 74  HNCPQAIVAHLATAKLGGIVVPCGPLSRQHELRDQLADSGAKILVAAADLMPIVEAARPG 133

Query: 142 TQVKHVVLTSLGQMLP------RAKGTIVDFVVKYVKGMVPKYDLPGAIS------MRKA 189
           T V  V+ T    + P      +A     + +        P  + PGA        M + 
Sbjct: 134 TSVTTVITTRYADLQPSQPACRKALAVPPELIAADASSAPPLKNKPGAAQLDLMQLMAEP 193

Query: 190 LHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMV---ANVLQAKGAYGPVL 246
           +    R       +  +++A + YT GTTG  KGA+LTHRN +   A  +Q  G      
Sbjct: 194 VDVAERDAVAAIQVGLDEVALMVYTSGTTGRPKGAMLTHRNALYKTAVTVQVGGI----- 248

Query: 247 QEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPFTAITGV 306
            +  ++++   PL H+  + +   + +  G   +L+    D    ++ + +Y  T    +
Sbjct: 249 -QAADVLLAVAPLSHIAGMLMGMNVMLYSGAPTILLYR-FDPLAVLQAIDRYRVTWWYSM 306

Query: 307 NTLFNALVNNEDFHELDFKNMKL--AVGGGMAVQRAVAERWKKTTGVHLLE---GYGLTE 361
             +  A++ + D  +   +++        G+ +  A+AE+W+   G         YGL+E
Sbjct: 307 TPMNLAVMAHPDAAQYRMESLVTNPCTSFGVTLTEAIAEQWRTFAGPQCRTYEAAYGLSE 366

Query: 362 CSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDD-AGNVVPNDQVGELQVRGPQVMQGYWQ 420
                   P D   + G  G  VP TEVRIVD   G  +P  Q GE+ +R P V +GYWQ
Sbjct: 367 THTCDAITPADAPRW-GWHGKIVPQTEVRIVDPHTGAELPPGQAGEITIRSPGVFRGYWQ 425

Query: 421 RPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGK 480
           R EAT+ VL+  G+L TGDI +    G +    R K+MI VSG++V+P E+E +++ H  
Sbjct: 426 RDEATRAVLH-NGFLRTGDIGQVSPDGYLQWQGRIKEMIKVSGYSVFPEEVEALLSRHPG 484

Query: 481 VLEVAAIGQANDVSGELVKIYVVKRDP-SLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPK 539
           + +VA     +   GE+V  +VV     +L++ E+IA  R ++  YKVP+ V+F D LP 
Sbjct: 485 IRQVAVTPIPDPDKGEVVCAHVVPMSGVTLSEAELIAWSRDNMAPYKVPRRVKFHDALPA 544

Query: 540 TNVGKILRRVLREE 553
           T  GK+LRR+LREE
Sbjct: 545 TATGKVLRRLLREE 558