Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., long-chain fatty acid--CoA ligase from Burkholderia phytofirmans PsJN

 Score =  607 bits (1565), Expect = e-178
 Identities = 311/557 (55%), Positives = 405/557 (72%), Gaps = 8/557 (1%)

Query: 1   MDKPWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRA 60
           MDK WL  YP  VP  I+P +Y S+ E+ E++  ++  +PAF+ MG  +++ +L+  SR 
Sbjct: 1   MDKIWLKSYPPGVPAEIDPSRYSSVGELLEEAFREHRAKPAFVCMGKEISYGELDALSRK 60

Query: 61  FAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDA 120
            AA+ Q+   L +G R+A+MMPN+LQYPVA+  +LRAG + VNVNPLYTPRELEHQL D+
Sbjct: 61  LAAWFQSK-GLARGARIAIMMPNVLQYPVAIAAILRAGYVVVNVNPLYTPRELEHQLKDS 119

Query: 121 DARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL 180
            A AI+++ NFA TL+ IV NT +KHVV+ ++G ++   KGT+V+FVV+ VK MVP + L
Sbjct: 120 GAEAIILLENFAVTLQAIVRNTSIKHVVVAAMGDLMG-IKGTLVNFVVRKVKKMVPAWSL 178

Query: 181 PGAISMRKALHKGRRLQYVKPFMSG-EDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAK 239
           PG +    A+ +G R Q  KP   G ED+AFLQYTGGTTGVAKGA L HRN++ANVLQ++
Sbjct: 179 PGHVKFNTAIAEGAR-QNFKPVQQGPEDVAFLQYTGGTTGVAKGATLLHRNLIANVLQSE 237

Query: 240 GAYGPVLQEGREL----VVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKEL 295
               PV    +++     V ALPLYHVFALTV  LL I  GG  +LI NPRDIPG +K L
Sbjct: 238 IWLDPVRANRKDIDQFVTVVALPLYHVFALTVCGLLTIRTGGLGVLIPNPRDIPGMIKAL 297

Query: 296 QKYPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLE 355
           + YP T I  VNTL+NAL+N+ DFH+LDF  +  A GGGMAVQ AVA+RW + T   ++E
Sbjct: 298 EGYPITTIPAVNTLYNALLNSPDFHKLDFSKLIAANGGGMAVQEAVAKRWYEQTHTPIIE 357

Query: 356 GYGLTECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVM 415
           GYGL+E SP VT NP  +T+Y+G IGLP+PSTE+ I DD GN VP  Q GE+ +RGPQVM
Sbjct: 358 GYGLSETSPCVTCNPVTVTEYSGTIGLPLPSTEISIRDDEGNEVPLGQPGEICIRGPQVM 417

Query: 416 QGYWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVV 475
            GYW RP+ T +V+ A+G+  +GD+   +D G + IVDRKKDMILVSGFNVYPNEIEDVV
Sbjct: 418 AGYWNRPDETAKVMTADGFFKSGDVGLMNDGGFVKIVDRKKDMILVSGFNVYPNEIEDVV 477

Query: 476 ALHGKVLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRD 535
           A    V EVAA+G  +  SGE VK++VVK+D +LT  ++ A+C++ LTGYK PK+VEFR 
Sbjct: 478 AKLPGVFEVAAVGVPDQHSGEAVKLFVVKKDQALTDADIFAYCKQQLTGYKRPKIVEFRT 537

Query: 536 DLPKTNVGKILRRVLRE 552
           +LPK+NVGKILRR LR+
Sbjct: 538 ELPKSNVGKILRRELRD 554