Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

 Score =  475 bits (1222), Expect = e-138
 Identities = 243/537 (45%), Positives = 347/537 (64%), Gaps = 20/537 (3%)

Query: 21  QYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAYLQNDLKLKKGDRVALM 80
           +Y SL+++ E++  ++ D+ A+  +G   +F  +E  SR FAAYLQN+  LK GDR+A+ 
Sbjct: 13  KYSSLIDLIERTSQRFGDKTAYACLGKTSSFNDIERDSRYFAAYLQNNTNLKPGDRIAIQ 72

Query: 81  MPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIVIVSNFANTLEQIVA 140
           +PN+ Q+ +A +G LRAG+I VN NPLYT REL HQ ND+ A+A+V++S+   TL ++VA
Sbjct: 73  LPNITQFVIAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVLSDLLPTLAKVVA 132

Query: 141 NTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGAISMRKALHKGRRLQYVK 200
            T ++ V+ T             +D +   V+   PK  L   +   + L +G  L + +
Sbjct: 133 TTPIELVISTHP-----------LDLIDPQVQ---PKTGLKN-VEFCQVLKQGAELPFSR 177

Query: 201 PFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYGPVLQEGRELVVTALPLY 260
              +  D+A LQYTGGTTG++KGA+LTH NM+AN  Q K   G V+ EG ++ V  LP+Y
Sbjct: 178 FVPAANDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVITEGEDIFVAPLPIY 237

Query: 261 HVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPFTAITGVNTLFNALVNNEDFH 320
           H++A  VN +L+ E GG ++LI NPRDI G +K L KYPFT   G+NTLF AL +  +F 
Sbjct: 238 HIYAFMVNLVLYFECGGCSVLIPNPRDISGLIKTLAKYPFTGFAGLNTLFVALCHQPEFK 297

Query: 321 ELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTECSPLVTGNPYDLTDYTGAI 380
            LDF ++K+ + GG A+  A A  W++TTG  + EGYGL+E SP+++ N        G I
Sbjct: 298 ALDFSHLKITISGGTALTAAAANIWQQTTGNTISEGYGLSETSPVISLNAPGY-QKIGTI 356

Query: 381 GLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQRPEATKEVLNAEGWLSTGDI 440
           G PV  TEV+++D+ GN V   + GEL  RGPQVM GYW  P+ T  V+ A+G+  TGDI
Sbjct: 357 GKPVLGTEVKLLDENGNEVAQGEAGELAARGPQVMLGYWNNPQETANVMTADGFFKTGDI 416

Query: 441 VKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLEVAAIGQANDVSGELVKI 500
              +++G   IVDRKKDMI+VSGFNVYPNE+E+V+A H  ++E A +G  ++ SGE VK 
Sbjct: 417 AILNEEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKDEHSGEAVKA 476

Query: 501 YVVKRDPS----LTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKTNVGKILRRVLREE 553
           +VV +D S      K  ++  CR+ LT YK+PKL+EF   LPK+ VGKILRR L+ +
Sbjct: 477 FVVLKDDSQDHEQMKTAILNFCREQLTAYKLPKLIEFMPQLPKSTVGKILRRELKHQ 533