Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., Ribonuclease D (EC 3.1.26.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  214 bits (546), Expect = 2e-60
 Identities = 127/371 (34%), Positives = 201/371 (54%), Gaps = 7/371 (1%)

Query: 7   LSVNYQIISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPT 66
           ++++   I     L + C   +    V LDTEF+R  TF+P  GL+Q+ DG+   LIDP 
Sbjct: 1   VAIDIHWIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGKRAYLIDPL 60

Query: 67  VLDEMTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGF 126
            +D   P   LL++ +VLKVLHAC EDLEV     G  P P+ DTQ+ AA+L  G S G+
Sbjct: 61  TIDNWQPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY 120

Query: 127 AALVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGW-WD 185
           + LVQ+ L +EL K E+R+DWL RPLS+ Q+ YAA D  +L  ++  L  +++   + W 
Sbjct: 121 SRLVQEVLGIELPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVLLRPKLSDEKYRW- 179

Query: 186 AALQESELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNF 245
             L++    VA   +  +P   Y + K AW+L   +LA+L+ L  WR  EA  RDL  N 
Sbjct: 180 -VLEDGAELVANLRREVDPYEVYREAKLAWKLSRAQLAVLRELCAWREREARARDLPRNR 238

Query: 246 VIKETDLLTISRLALRSPKRMEE-EGVDPHAIRRHSSKIIAMVKTALETPADAYPPEIVP 304
           +I+E  L  ++R    +   + + E + P  +R+    ++ +++ A   P + +PP +  
Sbjct: 239 IIREHSLWPLARTQPDNLGALAKIEDMHPRTVRQDGQFLLDLIQRAASVPPEQWPPAVAE 298

Query: 305 IMEYPGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQ 364
            +       L KRL+   ++ +    +A E +  KK L  L+   +     P +LPD ++
Sbjct: 299 PLPIEA-SALVKRLRALGQAEAERLEIAPELMLRKKTLEALIKSGF--PEGPYQLPDSLR 355

Query: 365 GWRLPLLGEKL 375
           GWR  L+G+ L
Sbjct: 356 GWRRELMGQAL 366