Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., ribonuclease D from Pseudomonas stutzeri RCH2

 Score =  228 bits (581), Expect = 2e-64
 Identities = 134/375 (35%), Positives = 206/375 (54%), Gaps = 15/375 (4%)

Query: 7   LSVNYQIISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPT 66
           +++  Q +     L  +C   R    V +DTEF+R  TF+P  GL+Q+ DG    LIDP 
Sbjct: 1   MAIETQWVLDDEHLTHLCAEWRQLPYVAVDTEFMRVDTFYPIAGLVQVGDGRRAYLIDPL 60

Query: 67  VLDEMTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGF 126
            + + + F  +LQD +V+KVLHAC EDLEV     G  P P+ DTQ+ A +L  G S G+
Sbjct: 61  AVHDWSAFAAVLQDNAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNIGFSMGY 120

Query: 127 AALVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQ--AGWW 184
           + LVQ  L +EL K E+R+DWL RPLSD Q++YAA D  +L  +YE L+ ++++    W 
Sbjct: 121 SRLVQAVLGIELPKGETRSDWLQRPLSDMQVQYAAEDAQHLAELYEALLPKLSEDKRAW- 179

Query: 185 DAALQESELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALN 244
              L++    VA   + S+PE AY ++K AW+LKP++LA+LK L  WR  +A  R+   N
Sbjct: 180 --VLEDGAELVANLQRESDPEEAYREVKQAWRLKPQQLAVLKVLTAWRERQARARNQPRN 237

Query: 245 FVIKETDLLTISRLALRSPKRMEE-EGVDPHAIRRHSSKIIAMVKTALETPADAYP---P 300
            V++E  L  ++R   R    +   E + P  +R+    ++ M+  A  TP   +P   P
Sbjct: 238 RVLREASLWPLARTQPRDLVTLARIEDMHPRTVRQDGEALLQMIGQAAATPEQDWPAPLP 297

Query: 301 EIVPIMEYPGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLP 360
           E +P+        + K+L+   +  +    +A E +  KK L  LL   +     P +LP
Sbjct: 298 EPLPL----EVSSVLKKLRAVGQHEAKVLDIAPELMLRKKTLEALLKSGY--PDGPYQLP 351

Query: 361 DLMQGWRLPLLGEKL 375
           D ++GWR   +G+ L
Sbjct: 352 DSLRGWRRERMGQAL 366