Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., Ribonuclease D from Pseudomonas syringae pv. syringae B728a

 Score =  207 bits (528), Expect = 3e-58
 Identities = 125/373 (33%), Positives = 202/373 (54%), Gaps = 11/373 (2%)

Query: 7   LSVNYQIISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPT 66
           ++++   I     L R C   +    V LDTEF+R  TF+P   L+Q+ DG++  LIDP 
Sbjct: 1   MAIDIHWIRDDDSLARHCAQWQSLPFVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPL 60

Query: 67  VLDEMTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGF 126
           ++++  P   LL++  V+KV+HAC EDLEV     G  P P+ DTQ+ AA+L  G S G+
Sbjct: 61  LINDWRPLSALLENPDVIKVVHACSEDLEVLLRLTGSLPVPLFDTQLAAAYLNLGFSMGY 120

Query: 127 AALVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGW-WD 185
           + LVQ+ L ++L K E+R+DWL RPLS+ Q+ YAA D  +L  ++  L  +++   + W 
Sbjct: 121 SRLVQEVLDIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTILRPRLSDDKYAW- 179

Query: 186 AALQESELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNF 245
             L +    VA   +  +P   Y D K AW+L   +LA+L+ L  WR  EA  R+L  N 
Sbjct: 180 -LLDDGAELVANLRREVDPYEVYRDAKLAWKLSRAQLAVLRELCAWREREARARNLPRNR 238

Query: 246 VIKETDLLTISRLA---LRSPKRMEEEGVDPHAIRRHSSKIIAMVKTALETPADAYPPEI 302
           +++E  L  +++     L +  R+E+  + P  +R     ++ ++KTA   P + +PP +
Sbjct: 239 IVREHSLWPLAKTQPDNLGALARIED--MHPRTVRHDGEFLLELIKTASVLPPEEWPPAL 296

Query: 303 VPIMEYPGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDL 362
              +       + KRL+   +  +    +A E +  KK L  LL   +     P +LPD 
Sbjct: 297 PEPLPIDAAGSI-KRLRAIGQQYAEQLDMAPELMLRKKTLEALLKSGY--PDGPYQLPDS 353

Query: 363 MQGWRLPLLGEKL 375
           ++GWR  L+G+ L
Sbjct: 354 LRGWRRELMGQAL 366