Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., ribonuclease D protein from Sinorhizobium meliloti 1021

 Score =  155 bits (392), Expect = 2e-42
 Identities = 114/366 (31%), Positives = 179/366 (48%), Gaps = 16/366 (4%)

Query: 13  IISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLD-EM 71
           +I    DL+  C     +  + +DTEF+R  TF+P L LIQM   E   ++DP     ++
Sbjct: 1   MIQTTADLEAACRELARSSYITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDL 60

Query: 72  TPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQ 131
            PF  L+ +  V+KV HA  +D+E+  +     P P+ DTQ+ A   G+G S  +  LV 
Sbjct: 61  APFFALMSNPDVVKVFHAARQDIEIIHHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVN 120

Query: 132 DQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAALQES 191
                ++DKS   TDW  RPL+DKQL+YA ADV +L  +Y+ L +++ + G      +E 
Sbjct: 121 RIKNEQIDKSSRFTDWSRRPLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEM 180

Query: 192 ELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIKETD 251
            +  ++ T   +P+ A+  +K   + KP ELA+L+ +A WR  EA  R++    +IK+  
Sbjct: 181 AILESRETYDLHPDNAWQRLKMRVK-KPIELAVLQKVAAWREREARARNVPRGRIIKDD- 238

Query: 252 LLTISRLALRSPKRMEEEG---VDPHAIRRHS--SKIIAMVKTALETPADAYPPEIVPIM 306
              I  +A + PK  E  G     P    R S  + +I  V  AL  P    P       
Sbjct: 239 --AIYEIAQQQPKDAEALGRLRTIPKGWERSSAGTALIEAVGEALAIPRGELPRLPRQNH 296

Query: 307 EYPGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQGW 366
              G     + LK  +K +S   G+A + +A+   L+++ +       D A L    +GW
Sbjct: 297 APEGAAAASELLKVLLKLISEKEGVAAKIIANSDDLDRIAA--EGEGADVAAL----KGW 350

Query: 367 RLPLLG 372
           R  L G
Sbjct: 351 RRELFG 356