Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., ribonuclease D (RefSeq) from Shewanella amazonensis SB2B

 Score =  257 bits (656), Expect = 4e-73
 Identities = 145/352 (41%), Positives = 212/352 (60%), Gaps = 8/352 (2%)

Query: 32  VVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLDEMTPFVELLQDTSVLKVLHACG 91
           +++LDTEFVRTRT++ +LGLIQ++DG  L+LIDP  + +++ F  LL + ++LK++H+C 
Sbjct: 25  LLVLDTEFVRTRTYYAKLGLIQVYDGNTLALIDPLDIQDLSGFWALLTNPNILKLVHSCS 84

Query: 92  EDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQDQLQVELDKSESRTDWLARP 151
           EDLEVF       P P+ D+QI AA  G G   G+A LV++ L   LDK ESRTDW+ RP
Sbjct: 85  EDLEVFARYGKVQPTPLFDSQIAAALSGMGHGLGYAKLVEECLGQTLDKGESRTDWIKRP 144

Query: 152 LSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAALQESELQVAKRTKVSNPELAYLDI 211
           L+D QL+YAA DVFYL  +Y +L +++   G +D  L+E       R +      AYL +
Sbjct: 145 LTDAQLQYAANDVFYLYQLYPQLEQKLKTLGRFDWVLEEGARLTEGRLQRPEAATAYLKV 204

Query: 212 KGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIKETDLLTISRLALRS-PKRMEEEG 270
           K A+QL PK+LA LK LA WR   A++RDLAL FVIK+  L+ +++   RS    ++   
Sbjct: 205 KNAFQLTPKQLAYLKVLAAWRLERALDRDLALGFVIKDHALIALAKKPPRSISDLLKIND 264

Query: 271 VDPHAIRRHSSKIIAMVKTA-LETPADAYPPEIVPIMEYPGYKQLFKRLKDEVKSVSNTS 329
           +  H  R H   I+ +++ A +E P    P  I  I   P YKQ FK +K  +  +    
Sbjct: 265 LSEHEKRIHGKDILKVLQKADVENP----PAAIDVIALKPAYKQAFKNIKAALTEICERE 320

Query: 330 GLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQGWRLPLLGEKLNTLVLK 381
           GL +E   SK+ +++ L + W+ D +    P L+QGWR  L  + L  LVL+
Sbjct: 321 GLPSELFCSKRHIHEYLEYRWQGDAEDT--PLLLQGWRGKLATDVLQALVLE 370