Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., Ribonuclease D (NCBI) from Rhodospirillum rubrum S1H

 Score =  161 bits (408), Expect = 3e-44
 Identities = 121/369 (32%), Positives = 180/369 (48%), Gaps = 21/369 (5%)

Query: 13  IISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLD-EM 71
           +IS   DL   C        V +DTEF+R +T++P+L LIQ+        +DP   D +M
Sbjct: 3   LISTTKDLADFCARLSTESFVTVDTEFMREKTYWPKLCLIQLAGTTEAHCVDPLAPDIDM 62

Query: 72  TPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQ 131
            P   L+ + SVLKV HA  +DLE+F +  G  P P+ DTQ+ A   G+G S G+  LV 
Sbjct: 63  APLFALMANESVLKVFHAARQDLEIFLHESGHLPKPIFDTQVAAMVCGFGDSVGYETLVA 122

Query: 132 DQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAG---WWDAAL 188
              +  +DKS   TDW  RPL+D+QL YAA DV +L  +YE+L E +   G   W D   
Sbjct: 123 KLAKARIDKSMRFTDWARRPLNDRQLVYAAGDVTHLRVVYERLAETLAANGRTAWLD--- 179

Query: 189 QESELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIK 248
           QE  +          PE A++ IK A     + LA+L+ LA WR   A  RDL  N V++
Sbjct: 180 QEMAILTDPAHYRVEPEDAWMRIK-ARSRSARFLALLQELAAWRERTAQERDLPRNRVMR 238

Query: 249 ETDLLTISRLALRSPKRMEEEGVDPHAIRRHSS--KIIAMVKTALETPADA--YPPEIVP 304
           +  LL I+  A  +P  + +       +   +    I+  V+ A   P  A  +PP+   
Sbjct: 239 DEGLLEIAASAPTTPDALSQLRSVSKGMAEGTMGLGILEAVRLAQAIPEKALPHPPDRED 298

Query: 305 IMEYPGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQ 364
           + +  G   +   LK  +K     +G+A + +A+   L ++ +       D       M+
Sbjct: 299 LPQ--GLGPVVDLLKVLLKMKCEEAGVAQKLVANMNDLERIAA-------DDNADVLAME 349

Query: 365 GWRLPLLGE 373
           GWR  L GE
Sbjct: 350 GWRRALFGE 358