Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., putative ribonuclease D from Phaeobacter inhibens DSM 17395

 Score =  143 bits (360), Expect = 9e-39
 Identities = 115/376 (30%), Positives = 183/376 (48%), Gaps = 36/376 (9%)

Query: 14  ISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQM-FDG---ENLSLIDPTVLD 69
           ++   DLQ  C AA   D V +DTEF+R RT++ +L L+Q+ + G   EN  L+DP    
Sbjct: 4   LTSTEDLQAFCEAAAQHDYVTVDTEFLRERTYYSKLCLVQLAYPGAGDENAVLVDPLADG 63

Query: 70  -EMTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAA 128
             + P  +L ++ +V+KV HA  +DLE+F       P P+ DTQ+ A   G+G   G+  
Sbjct: 64  LSLEPLYDLFRNETVVKVFHAARQDLEIFWVDAQVFPKPLFDTQVAAMVCGFGEQVGYET 123

Query: 129 LVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAAL 188
           LV+  ++  LDK+   TDW  RPLSD Q  YA ADV +L  +YE L  ++ + G   A  
Sbjct: 124 LVRKIVKQGLDKTSRFTDWSRRPLSDAQKTYALADVTHLRQIYEYLAAELKRTG--RARW 181

Query: 189 QESELQVAKRTKVSNPELAYLDIKGAWQL------KPKELAILKPLATWRYHEAVNRDLA 242
            E ELQV     +++P    +D + AW+         K LA+++ LA +R   A   ++ 
Sbjct: 182 VEEELQV-----LTDPATYDVDPQEAWRRVKTRTNSGKFLAVVRELAAFRETYAKTNNVP 236

Query: 243 LNFVIKETDLLTISRLALRSPKRMEEEGVDPHAIRRHSSK------IIAMVKTALETPAD 296
            N V K+  L+    LA   PK   + G +   + R + K      I+  V   ++ PA 
Sbjct: 237 RNRVFKDDALV---ELASTKPKNASDLG-NSRLLLREARKGAIAEGILQAVARGVDCPAG 292

Query: 297 AYPPEIVPIMEYPGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDP 356
           + P       +      L   L+  +K+ +  SG+A + +A    L+ + +         
Sbjct: 293 SQPQPDRSREKLQVNPALADLLRVLLKAKTEASGVAAKLIAPSSDLDAIAA--------G 344

Query: 357 ARLPDLMQGWRLPLLG 372
            R    ++GWRL + G
Sbjct: 345 QRNVPALKGWRLEVFG 360