Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., Conserved hypothetical alanine rich protein from Mycobacterium tuberculosis H37Rv

 Score = 58.2 bits (139), Expect = 4e-13
 Identities = 78/314 (24%), Positives = 123/314 (39%), Gaps = 35/314 (11%)

Query: 62  LIDPTV-----LDEMTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAA 116
           LIDP       L  + P  E+L       +LH+  +DL       G  P  + DT++   
Sbjct: 84  LIDPVSHGGDPLTVLAPVAEVLSTNEW--ILHSADQDLPCLAEV-GMRPPALYDTELAGR 140

Query: 117 FLGYGLSTGFAALVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVE 176
             G+      AA+V+  L + L K     DW  RPL    L YAA DV  L+ +   +  
Sbjct: 141 LAGFD-RVNLAAMVERLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAAISR 199

Query: 177 QVTQAGWWDAALQESELQVAKRTKVSNPELA------YLDIKGAWQLKPKE-LAILKPLA 229
            + + G  D A QE E     R+  S P  A      +    G  ++  +  LA ++ L 
Sbjct: 200 VLAEQGKTDWAAQEFE---HLRSFESRPPPAAARQDRWRRTSGIHKVHDRRGLAAVRELW 256

Query: 230 TWRYHEAVNRDLALNFVIKETDLLTISRLALRSPKRMEEEGVDPHAIRRHSSKIIAMVKT 289
           T R   A  RD+A   ++ ++ ++     A+  PK +++    P    R+  +  A+   
Sbjct: 257 TARDRIAQRRDIAPRRILPDSAIID---AAIADPKSVDDLVALPVFGGRNQRRSAAVWWA 313

Query: 290 ALET------------PADAYPPEIVPIMEYPGYKQLFKRLKDEVKSVSNTSGLATEFLA 337
           AL              PA+  PP    +   P         +  +  VS    + TE L 
Sbjct: 314 ALAAARESPDPPEIAEPANGPPPPGRWVRRKPAAAARLDAARAALTEVSQRVRVPTENLV 373

Query: 338 SKKQLNQLLSWVWK 351
           S   L + L W W+
Sbjct: 374 S-PDLVRRLCWEWE 386