Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., ribonuclease D from Marinobacter adhaerens HP15

 Score =  174 bits (442), Expect = 3e-48
 Identities = 116/339 (34%), Positives = 176/339 (51%), Gaps = 11/339 (3%)

Query: 35  LDTEFVRTRTFFPQLGLIQM-FDGENLSLIDPTVLDEMTPFVELLQDTSVLKVLHACGED 93
           LDTEF R  TF+P  GL+Q+  DGE   L+DP+V ++   F E+L D    K+L+A  ED
Sbjct: 43  LDTEFERVNTFYPIPGLVQLGLDGE-FCLVDPSVAEQSGRFREVLADPDTPKLLYAMSED 101

Query: 94  LEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQDQLQVELDKSESRTDWLARPLS 153
           LE+F+      P  ++D QI AA  G G S G+A LV+      LDKS +R+DWLARPLS
Sbjct: 102 LELFRQWLNLQPAGVIDLQIGAAMAGAGFSLGYARLVETLFGETLDKSATRSDWLARPLS 161

Query: 154 DKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAALQESELQVAKRTKVSNPELAYLDIKG 213
           D Q  YA  D+ +L PMY  +   +   G   A ++ES     +     +P+  YL ++ 
Sbjct: 162 DAQQRYAIDDIRFLEPMYHWVSALLRDRGLEAALVEESARFANELAGQEDPDNHYLKLRA 221

Query: 214 AWQLKPKELAILKPLATWRYHEAVNRDLALNFVIKETDLLTISRLALRSPKRMEE-EGVD 272
            W L  ++  +LK L  WR  E   RD   N V+ +  L+ I+     S K +   +GV 
Sbjct: 222 GWTLSAQQQGVLKELVRWRERECQRRDRPRNRVLADALLIAIAERLPASVKELSNIQGVP 281

Query: 273 PHAIRRHSSKIIAMVKTALETPADAYPPEIVPIMEYPGYKQLFKRLKDEVKSVSNTSGLA 332
             A+RR+   +I +V     T  ++    I P +     +  FK+LK   ++ +  + + 
Sbjct: 282 SGAVRRYGDTLIELVSRG-STADNSSLERIAPPLS-RDQQGFFKQLKRLFRNAAEDADIP 339

Query: 333 TEFLASKKQLNQLLSWVWKRDRDPARLPDLMQGWRLPLL 371
            E LA +K+L +++     +  D A+  D  QGWR  +L
Sbjct: 340 MELLAPRKRLEKVV-----QQPDLAQ-HDFFQGWRAQIL 372