Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., exonuclease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 49  LGLIQMFDGENLSLIDPTVL-DEMTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFP 107
           L L+Q+   +   L    VL D       LL++  +LKV      D +  +  +     P
Sbjct: 99  LSLVQLATADTCYLFQQAVLGDAFAQLKPLLENEQILKVGIGLRGDGQALKRDWNILVSP 158

Query: 108 MVDTQIMAAFLGYGLSTGFAALVQDQLQVELDKSESRT--DWLARPLSDKQLEYAAADVF 165
            +D     A LG G   G   LV   L   +DK +  T  +W   PLS  Q++YAA D  
Sbjct: 159 RLDLNWAMAQLGAGKEMGTRQLVAVLLHQRIDKPKKITLSNWQQVPLSPAQIQYAALDAL 218

Query: 166 YLLPMYEKLVEQV 178
                + +L+E++
Sbjct: 219 AANHCFWQLIEKL 231