Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., ribonuclease D from Bifidobacterium breve UCC2003

 Score = 58.2 bits (139), Expect = 4e-13
 Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 13/250 (5%)

Query: 13  IISQVGDLQRVCLAARDAD-VVMLDTEFVRTRTFFPQLGLIQMF-DGENLSLIDPTVLDE 70
           + S +     VC A  DA   +  D E      +  +  LIQ   +G  ++L+DP  L +
Sbjct: 22  VTSTIEGYHHVCEALADASGSLAADAERASGFRYGHEDWLIQCKREGAGIALLDPIALTQ 81

Query: 71  M----TPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGF 126
                  F + + D +   +LH    DL  F +  G  P  + DT+I A  LG     G 
Sbjct: 82  SGADWNEFNDAVGDATW--ILHDSLMDLPGFAD-LGLQPKALFDTEIAARLLGLH-RFGL 137

Query: 127 AALVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDA 186
           AA+ +  L + L K  S  DW  RPL      YAA DV  L+ +   +   +  AG  + 
Sbjct: 138 AAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELENLMRRDLRAAGKDEW 197

Query: 187 ALQESELQVAKRTKVSNPE-LAYLDIKGAWQLK--PKELAILKPLATWRYHEAVNRDLAL 243
           A +E    +++      P  + +L I    QL   P+ LAI K L   R   A   D+A 
Sbjct: 198 AEEEFTHALSEGLAPRKPHPVPWLRISRITQLSRDPQGLAIAKSLWQERDKLARQHDIAP 257

Query: 244 NFVIKETDLL 253
           + ++ ++ ++
Sbjct: 258 SLLLSDSSII 267