Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., ribonuclease D (RefSeq) from Shewanella sp. ANA-3

 Score =  245 bits (626), Expect = 1e-69
 Identities = 141/376 (37%), Positives = 214/376 (56%), Gaps = 20/376 (5%)

Query: 11  YQIISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLDE 70
           +Q +S    L  +    + + +++LDTEFVRTRT++ +LGLIQ +DG+ L+LIDP  L +
Sbjct: 23  FQYVSDEASLNALVAQYQQSPLLVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALPD 82

Query: 71  MTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALV 130
           ++ F  LL + +++K++H+C EDLEVF +     P P+ D+QI A+  G G   G+A LV
Sbjct: 83  LSAFWSLLDNPNIIKLVHSCSEDLEVFAHYGQRQPTPLFDSQIAASLCGMGHGLGYAKLV 142

Query: 131 QDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQV---TQAGWWDAA 187
           +  L   +DK ESRTDW+ RPL++ QL YAA DV YL  +Y +L +++    + GW    
Sbjct: 143 ETCLGEVIDKGESRTDWMRRPLTEAQLSYAANDVLYLYQLYPQLADKLKAQDRLGW---L 199

Query: 188 LQESELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVI 247
            +E E     R    + + AYL +K A+QL   +LA LK LA WR  +A+ RDLAL FVI
Sbjct: 200 YEEGERMTEGRLATPDMDTAYLRVKNAFQLTEHQLAYLKVLAKWRLEKALARDLALGFVI 259

Query: 248 KETDLLTISRLALRSPKRMEE----EGVDPHAIRRHSSKIIAMVKTALETPADAYPPEIV 303
           K+  L+    LA + PK M +      +     R H   I+ +++TA      + PPE+V
Sbjct: 260 KDHGLIA---LAKKQPKSMGDLLKLNDLTEQEKRIHGKDILRVMQTA----DLSNPPELV 312

Query: 304 PIMEY-PGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDL 362
            ++   PGYK  FK +K  +  +     +  E L SK+ +++ L W W  D+    LP +
Sbjct: 313 DVLALKPGYKSAFKNIKTCLSELCEQHAIPMEMLGSKRHIHEYLQWRW--DKQQGELPTV 370

Query: 363 MQGWRLPLLGEKLNTL 378
           + GWR  +  E L  L
Sbjct: 371 LSGWRGQIAAESLAKL 386