Pairwise Alignments

Query, 183 a.a., rhombosortase from Vibrio cholerae E7946 ATCC 55056

Subject, 201 a.a., rhomboid family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  138 bits (347), Expect = 7e-38
 Identities = 78/177 (44%), Positives = 103/177 (58%), Gaps = 9/177 (5%)

Query: 4   YLLLLAISLLSLSLQ-----WPPLHELTLWHFSAIEQGQWWRILTGNFAHTNFAHWAMNL 58
           Y L L +SLL   L       P +  L  +  SAI  GQWWR++TGN  HTN  H  MNL
Sbjct: 12  YWLALIVSLLCALLYVAGLFTPSIDNLLAYRRSAISDGQWWRLITGNLLHTNHWHLLMNL 71

Query: 59  AALWIISFV----FKPTARQLLIPLLLISLAVGVMILASDMQSYVGLSGTLHGLFAYYAL 114
           A LW++ F+    ++      L  LL +   +G+ +    +  YVGLSG LHGLF + A+
Sbjct: 72  AGLWVVLFLHHFHYRLNGLTALFILLCLFEGIGLYLGYPQLLGYVGLSGMLHGLFTFGAV 131

Query: 115 NEALNGRRSSWLLVLGVIGKVAWEQWFGASASTAELIGARVATEAHLAGLVGGLLLA 171
            +     RS +LL+LGVI KV  EQ++GAS     +IGARVATEAHL GL+ GL+ A
Sbjct: 132 QDIRRKMRSGYLLLLGVIVKVGHEQFYGASDDVTAMIGARVATEAHLVGLICGLVCA 188