Pairwise Alignments

Query, 200 a.a., DTW domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.5 bits (145), Expect = 3e-14
 Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 7/186 (3%)

Query: 5   CSECGKARKACLCPSIVALESAVELIILQHPTEQKRPLGTARILSLSLANCRLLVGEDFR 64
           C  C    + C C     L +    +++ +  E  +P  + R+++  + +    +     
Sbjct: 33  CPLCLLGEQFCTCSLRKQLTTQASFLLIMYNDEVLKPTNSGRLIADLIPDTHAFLWSRTD 92

Query: 65  EHDELNQLLAEPDVDYYVLYPNEHAQECTKI-------SLTTARKTRVILLDGTWKKAYK 117
              EL  LL+      ++++P ++A +   +       +L   ++  +I+LDG+W++A K
Sbjct: 93  PAPELLALLSSDHYQPFLVFPAQYADQGQTVLSQVPMATLAKGKRPLLIMLDGSWREAIK 152

Query: 118 MWQINTQLHDLPSLHLPDECVGHYRIRKAPDDTALSTVEAGYHLLQQWQPERDFSPLLKV 177
           M++ +  L  LP L    + +  Y +RK   D  L T E     L     E +   L   
Sbjct: 153 MFRKSPYLQGLPILSFDPDTLATYALRKGSHDFQLGTAEVASLALAAMGEEANGKALTAW 212

Query: 178 FDAMIQ 183
           FD  ++
Sbjct: 213 FDLFVE 218