Pairwise Alignments

Query, 570 a.a., 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., Probable bifunctional menaquinone biosynthesis protein MenD : 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (SHCHC synthase) + 2-oxoglutarate decarboxylase (alpha-ketoglutarate decarboxylase) (KDC) from Mycobacterium tuberculosis H37Rv

 Score =  112 bits (279), Expect = 5e-29
 Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 12/178 (6%)

Query: 13  SRVLLEELSRLGVTQVCVAPGSRSTPLTL---EANANTAFTLHTHYDERGLGFMALGLAK 69
           +RV+++EL R GV  V + PGSR+ PL     +A+ +    LH   DER  G++A+GLA 
Sbjct: 8   ARVVVDELIRGGVRDVVLCPGSRNAPLAFALQDADRSGRIRLHVRIDERTAGYLAIGLAI 67

Query: 70  ASQQPVAVIVTSGTAVANLLPAIAESKLTGERLVVLTADRPLELVGCGANQAIVQSGIFS 129
            +  PV V +TSGTAVANL PA+ E+      L+VL+A+RP EL+G GANQ + Q G F 
Sbjct: 68  GAGAPVCVAMTSGTAVANLGPAVVEANYARVPLIVLSANRPYELLGTGANQTMEQLGYFG 127

Query: 130 SHVTASLEL------PSPAIHHPLSWLLTSIDEVMA---RQALLGGSVHINCPFPEPL 178
           + V AS+ L      P        +W   +   + A    +    G VH + P  EPL
Sbjct: 128 TQVRASISLGLAEDAPERTSALNATWRSATCRVLAAATGARTANAGPVHFDIPLREPL 185



 Score = 59.3 bits (142), Expect = 4e-13
 Identities = 67/213 (31%), Positives = 95/213 (44%), Gaps = 39/213 (18%)

Query: 364 HYAQSVRQLAQLHFSSSSLSEVALALDLTERATQADLFLGNSLIVRLVDIFSALDGR--E 421
           H   +VR+    H  ++ L   A          Q  L LG S  VR V + + LD R   
Sbjct: 338 HAIAAVREQLAAHPLTTGLHVAAAVSHALRPGDQ--LVLGASNPVRDVAL-AGLDTRGIR 394

Query: 422 VFSNRGASGIDGLVATASGVQRARQ------------KPLLMLLGDTSLLYDLNSLALMR 469
           V SNRG +GIDG V+TA G   A +               + L+GD + ++D  S  L+ 
Sbjct: 395 VRSNRGVAGIDGTVSTAIGAALAYEGAHERTGSPDSPPRTIALIGDLTFVHD--SSGLLI 452

Query: 470 NPAQP----TVIVVTNNDGGAIFDLL----PVPSEQREALYQMPHGMDFAHAASQFGLAY 521
            P +P      IVV+N++GG IF+LL    P  S+    ++  PH +D          A 
Sbjct: 453 GPTEPIPRSLTIVVSNDNGGGIFELLEQGDPRFSDVSSRIFGTPHDVDVG--------AL 504

Query: 522 CAAQTLEHYQTLVEE----HFAHGAGTLLIEVK 550
           C A  +E  Q  V+E        GAG  ++EVK
Sbjct: 505 CRAYHVESRQIEVDELGPTLDQPGAGMRVLEVK 537