Pairwise Alignments

Query, 263 a.a., 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., hydrolase, alpha/beta fold family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  136 bits (343), Expect = 4e-37
 Identities = 88/251 (35%), Positives = 128/251 (50%), Gaps = 14/251 (5%)

Query: 16  PLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTV 75
           P +VL+HG LGS ADW P++  L++     + LDLPGHG N            +   Q +
Sbjct: 13  PNLVLIHGFLGSKADWLPLIPQLSQ-HFHCICLDLPGHGDNQPEIASMLTNGFDFCVQDI 71

Query: 76  QAHVT--SEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARW 133
              +         L GYSLGGR+ +H LA+   +R+      +E  H GL   EE+AAR 
Sbjct: 72  INRLDRLGIEAFYLYGYSLGGRIALH-LAKAYPNRV--LSLWLESCHPGLTNTEEQAARS 128

Query: 134 QHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGS----SVAHMLL 189
           ++DQ WA+R         L  WYQQAVF+ ++   R TLIA+R+A L      ++ H+ L
Sbjct: 129 KNDQLWAKRLHSLSSRDFLQLWYQQAVFADMSDNVRNTLIAKRAAQLDQHPKHALKHIFL 188

Query: 190 ATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQQLAE----SSGLSYSQVAQAGHNVHHE 245
           ATSLA+Q  L      L    H+  G QD+KF  +A+       +   ++ QAGHN+H  
Sbjct: 189 ATSLARQASLWDLPANLACESHFFAGSQDAKFTAIAKEWQAKQPIILHRIEQAGHNIHQA 248

Query: 246 QPQAFAKIVQA 256
            P      +++
Sbjct: 249 NPAGLLACIRS 259