Pairwise Alignments
Query, 476 a.a., o-succinylbenzoate--CoA ligase from Vibrio cholerae E7946 ATCC 55056
Subject, 3154 a.a., Non-ribosomal peptide synthetase modules, pyoverdine?? from Pseudomonas fluorescens FW300-N2E2
Score = 95.9 bits (237), Expect = 2e-23
Identities = 125/506 (24%), Positives = 207/506 (40%), Gaps = 43/506 (8%)
Query: 8 VSLWQPWLERDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLH 67
+ ++ + + P+++A+ H Q+LT+ L+ A+ LR QGV+S ++V + + L
Sbjct: 481 IERFEQQVRQTPERIAMVHGEQSLTFDQLNRAANRLARHLRAQGVKSDDLVAVFDERGLD 540
Query: 68 TVLWFLACTQVGALCAFLAPQPLARLQEKLATLYAEQSPKHLWLAPSCALSEEDITALNA 127
V+ +A + GA +L P Q L ++P + A L+ E + L
Sbjct: 541 LVVMIVATLKAGA--GWLPLDPRNPPQRLAQVLRQSRTPLLIHSAGQGELAMEALDYLEQ 598
Query: 128 HRLSLPDERD--ESVGGEKVSSQFSGEQLATLIFTSGSTGTPKAVAHTHQQHLVSARGLL 185
S+ + S + ++ LA IFTSGSTGTPK H L + G L
Sbjct: 599 RPQSVLYDPAVLSSYSDDALNIPVHDRSLAYCIFTSGSTGTPKGAMVAHAGMLNNILGKL 658
Query: 186 NKFAFTESDSWLLSLPLYHISGVAILYRWLAVGA-TLKIGTGDLQNDIA--------GVT 236
+D + P V L +GA T+ +G +Q+ A G++
Sbjct: 659 PGLGLDATDVIAQTAPQCFDISVWQTLAGLVLGARTVILGDCVVQDPEALASAIERHGIS 718
Query: 237 HASLVPTQLKRLLDSS-SPLTLKRVLLGGSHIPVELAQMAATR--GIDTWLGYGMTEAAS 293
VP+ ++ LLD+ +L+ VL G +P LA+ R I YG E +
Sbjct: 719 ILEAVPSLMQSLLDAGLERSSLRWVLATGEALPPALARRWFERYPAIPLMNAYGPAECSD 778
Query: 294 TVT---------AKRVDGLAGNGELLEHRELRLVD---------GRIFIAGKTLAQGYYR 335
V +R + G L L D G IF+AG + +GY
Sbjct: 779 DVAFHPLLERLPEQRTNVPIGRATLNNRLYLLNADLQPIPAGAVGEIFVAGVGVGRGYMA 838
Query: 336 QGQLV-------PLTNEQG-WFDSKDLGRWQGN-NLLIDGRADNLFISGGENVHCEEIEA 386
P+ N+ + + DL R+ N +L GR D+ G + +EIEA
Sbjct: 839 DPARTAAVFLPDPIANDGSRLYRTGDLARFLPNGDLEYVGRTDHQVKIRGHRIELDEIEA 898
Query: 387 VLNQHPHVQVAIVIPVQDSEFGARPVAVIRSEAEWCQAIGDTWCQGKLEKFKWPIMYCLL 446
L ++P V+ A+V+ D + VA + ++A+ G L + P + L
Sbjct: 899 CLTRYPGVREAVVVARDDQQRSKVLVAYVVADAQASIEALREHVLGNLPPYMTPGAFVFL 958
Query: 447 PDALLDGGIKVSRAAVKAWLAANQTQ 472
L+G K+ R ++ A A Q+Q
Sbjct: 959 ERFPLNGNGKIDRKSLPAPDFAAQSQ 984
Score = 79.3 bits (194), Expect = 2e-18
Identities = 115/481 (23%), Positives = 194/481 (40%), Gaps = 48/481 (9%)
Query: 19 PKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACTQV 78
P+ +A+ Q L++ L++ A LR QGV + E++ + + LA +
Sbjct: 2582 PQALAVDCQDQQLSYAQLNALSNRLAHWLRAQGVGTDELIAVCLSRGPWLLPTLLAIHKA 2641
Query: 79 GALCAFLAPQPLARLQEKLATLYAEQSPKHLWLAPSCALSEEDITALNAHRLSLPDERDE 138
GA L PQ A ++L + P + C + + + +LSL E
Sbjct: 2642 GAAYLPLDPQHPA---DRLRFIIEHARPALVLSESQCGDALSGVDNVWLDQLSL-----E 2693
Query: 139 SVGGEKVSSQFSGEQLATLIFTSGSTGTPKAVAHTHQQHLVSARGLLNKFAFTESDSWLL 198
+ + + + +Q A +I+TSGSTGTPK V T + GL + + +D WL
Sbjct: 2694 ACSADNLMLAVNPQQRAYVIYTSGSTGTPKGVQVTRENLSNLLAGLDRQLPLSAADVWLA 2753
Query: 199 SLPLYHISGVAILYRWLAVGATLKIGTGDLQND-------IAGVTHASLVPTQLKRLLDS 251
S L+ L GA L + + D + T P + LL++
Sbjct: 2754 STTYAFDMCKPELFLPLVNGAALLLARREQVVDGHQLFALLRRATVFQATPAGWQILLET 2813
Query: 252 -SSPLTLKRVLLGGSHIPVELAQMAATRGIDTWLGYGMTEAASTVTAKRV----DGLAGN 306
+ R L+GG +P EL +RG+ YG TE T + + G+A
Sbjct: 2814 GQADWPPVRGLIGGEAVPGELVTELRSRGVVLINAYGPTETTVWSTTQALQEVPSGVADI 2873
Query: 307 GELLEHRELRLVD-----------GRIFIAGKTLAQGYYRQGQLV-------PLTNEQG- 347
G L + ++D G ++IAG + +GY P E G
Sbjct: 2874 GSPLLNTRCYVLDEMLRPVPLGTTGELYIAGAGVTRGYQHAAAATAAVYLPDPYAGEPGS 2933
Query: 348 -WFDSKDLGRWQGN-NLLIDGRADNLFISGGENVHCEEIEAVLNQHPHVQVAIVI--PVQ 403
+ + DL R +G+ L GR+D G + EIE+++ ++P V+ A+V+ P
Sbjct: 2934 RMYRTGDLVRRRGDGRLAYVGRSDFQVKVRGFRIEPGEIESLIRRYPGVEEAVVMIDPRS 2993
Query: 404 DSEFGARPVAVIRSEAEWCQAIGDTWCQGKLEKFKWPIMYCLLPDALLDGGIKVSRAAVK 463
S F A +++ + Q + +G L + P + L L+ K+ R A+
Sbjct: 2994 QSLF-----AWLQAPSPIDQVALRRYLEGLLPGYMVPAGFIELQRFALNANGKIDRKALP 3048
Query: 464 A 464
A
Sbjct: 3049 A 3049
Score = 58.9 bits (141), Expect = 2e-12
Identities = 104/422 (24%), Positives = 166/422 (39%), Gaps = 49/422 (11%)
Query: 17 RDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACT 76
R P VA+ + L++ LD A AL+ GV + V L + LA
Sbjct: 1540 RQPDAVAVLAGNERLSYGELDQAAERLATALQAHGVGIEDRVALSLPRDARLPMAMLAIL 1599
Query: 77 QVGALCAFLAPQPLARLQEKLATLYAEQSPKHLWLAPSCALSEE---DITALNAHRLSLP 133
+ GA LA + L A Q L A S A+ + + L+ +S
Sbjct: 1600 KAGAAYVPLAEDTPPERGRYI--LEAAQPKLCLGTAASLAVLAQWNSGVPLLDIDAMSAT 1657
Query: 134 DERDESVGGEKVSSQFSGEQLATLIFTSGSTGTPKAVAHTHQQHLVSARGLLNKFAFTES 193
D + +QLA +++TSGSTG PK VA + + + T
Sbjct: 1658 DSYKAPAS--------TAQQLAYVLYTSGSTGQPKGVAISRGNLMNLMLAVDQVLPMTAR 1709
Query: 194 DSWL-LSLPLYHISGVAILYRWLAVGATLKIGTGDLQNDIAGVTHASLV--PTQLK---- 246
D L L+ + I+ V +L LA GA++ + + D + + PT ++
Sbjct: 1710 DRVLALTTATFDIAIVELLLP-LAHGASILLADREQARDPQAIDQLLMTGQPTVMQATPA 1768
Query: 247 --RLLDSSSPLTLK--RVLLGGSHIPVELAQMAATRGIDTWLGYGMTEAASTVTAK-RVD 301
R+L + + + + R + GG +P LA+ RG GYG TEA T + R
Sbjct: 1769 TWRMLVAHTSRSWQGVRAVSGGEALPCALAEAIEGRGARVINGYGPTEATVYSTFEVRSG 1828
Query: 302 GLAG----NGELLEHRELRLVD-----------GRIFIAGKTLAQGYYRQGQLV------ 340
G AG G+ + + ++D G +++AG L +GY+ +L
Sbjct: 1829 GEAGVEVPIGQPVANTAAYVLDADLQPVAAGVPGELYLAGANLGRGYFAAPRLTAAAFLP 1888
Query: 341 -PLTNEQGWFDSKD-LGRWQGNNLLIDGRADNLFISGGENVHCEEIEAVLNQHPHVQVAI 398
P + + D + R L GR D G + EIEA+L + P V+ A
Sbjct: 1889 DPFVPGARMYRTGDRVRRNSQGGLDYLGRLDFQVKLRGFRIELGEIEALLARIPGVREAA 1948
Query: 399 VI 400
V+
Sbjct: 1949 VV 1950