Pairwise Alignments
Query, 476 a.a., o-succinylbenzoate--CoA ligase from Vibrio cholerae E7946 ATCC 55056
Subject, 5372 a.a., Amino acid adenylation from Pseudomonas syringae pv. syringae B728a
Score = 96.3 bits (238), Expect = 2e-23
Identities = 127/490 (25%), Positives = 212/490 (43%), Gaps = 42/490 (8%)
Query: 10 LWQPWLERDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTV 69
+++ ER P+ +A+ H Q L+++ L+ + A ALR+QGV+ V + + V
Sbjct: 4800 MFEAQAERTPEALAVVHGEQRLSYRQLNERANRLAHALRKQGVQPDSRVGICVERGPEMV 4859
Query: 70 LWFLACTQVGALCAFLAPQPLARLQEKLATLYAEQSPKHL--WLAPSCALSEEDITALNA 127
+ LA + G L P A +++A + + +P + A L++ + +N
Sbjct: 4860 VGLLAILKAGGGYVPLDP---AYPVDRIAYMLQDSAPAAVLAQTATQSLLADVSVPVIN- 4915
Query: 128 HRLSLPDERDESVGGEKVSSQFSGEQLATLIFTSGSTGTPKAVAHTHQQHLVSARGLLNK 187
L +DESV +V + LA LI+TSGSTG PK V H+ + +
Sbjct: 4916 --LDQDSWQDESVQNPEVPG-LTSVHLAYLIYTSGSTGLPKGVMIEHRNTVNFLTWAHSA 4972
Query: 188 FAFTESDSWLLSLPLYHISGVAILYRWLAVGATLKI--GTGDLQNDIAGVTHASLVPTQL 245
FA + + L S L V + L G ++K+ +LQ+ + + VP+ L
Sbjct: 4973 FAGSALEKTLFSTSLNFDLAVYECFGPLTSGGSIKVVQNVLELQHGDHDIGLINTVPSAL 5032
Query: 246 KRLLD-SSSPLTLKRVLLGGSHIPVELAQ-MAATRGIDTWLG-YGMTEA---ASTVTAKR 299
K LL+ +S P ++ V + G + L + + G+ YG +E +S V R
Sbjct: 5033 KALLEINSLPKSVHTVNVAGEALKRSLVENLFEKTGVQRLCNLYGPSETTTYSSWVAMDR 5092
Query: 300 VDGLA-------GNGE--LLEHRELRL---VDGRIFIAGKTLAQGYYRQGQLV------- 340
G A GN + LL+ ++ + V G I+I G +A+GY + L
Sbjct: 5093 EQGFAPHIGKPVGNTQFYLLDEQQQLVPLGVAGEIYIGGAGVARGYLNRDDLTAERFLAD 5152
Query: 341 --PLTNEQGWFDSKDLGRW-QGNNLLIDGRADNLFISGGENVHCEEIEAVLNQHPHVQVA 397
+ + + DLGR+ N+ GR D+ G + EI+A L +HP V A
Sbjct: 5153 TFSRHPQARMYRTGDLGRYLPDGNIEYLGRNDDQVKIRGFRIELGEIDARLAKHPAVHEA 5212
Query: 398 IVIPVQDSEFGARPVA---VIRSEAEWCQAIGDTWCQGKLEKFKWPIMYCLLPDALLDGG 454
+V +D R VA V+ ++ E W G+L + P+ Y L L
Sbjct: 5213 VVTAREDVPGDKRLVAYYTVLSAQTEPAIDSLRGWLLGQLPAYMVPVAYVRLDAMPLTPN 5272
Query: 455 IKVSRAAVKA 464
K+ R A+ A
Sbjct: 5273 GKLDRKALPA 5282
Score = 86.3 bits (212), Expect = 2e-20
Identities = 129/483 (26%), Positives = 202/483 (41%), Gaps = 66/483 (13%)
Query: 19 PKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACTQV 78
P AL QTL++ L+++ A L GVR + V + + ++ L +
Sbjct: 502 PDAAALVFEEQTLSYGELNARANQVAHRLLALGVRPDDRVAICVERGPAMIIGLLGILKS 561
Query: 79 GALCAFLAPQ-PLARLQEKLATLYAEQSPKHLWLAPSC--ALSEEDITALNAHRLSLPDE 135
GA L P PL E+LA + +P L S AL D+ + + L DE
Sbjct: 562 GAGYVPLDPAYPL----ERLAYTLGDSAPVALLSQQSVQPALPVSDVPLIYLDDVDLQDE 617
Query: 136 RDESVGGEKVSSQFSGEQLATLIFTSGSTGTPKAVAHTHQQHLVSARGLLNKFAFTESDS 195
R +VS + S LA +I+TSGSTG PK V H+ + F F E D
Sbjct: 618 R---ACNPQVSVRPS--DLAYVIYTSGSTGLPKGVMVEHRNVARLFSATQDWFGFNEQDV 672
Query: 196 WLL------SLPLYHISGVAILY--RWLAVGATLKIGTGDLQNDI--AGVTHASLVPTQL 245
W L ++ I G A+L+ R L V + D N + AGVT + P+
Sbjct: 673 WALFHSFAFDFSVWEIWG-ALLHGGRLLIVPQLVSRSPEDFYNLLCSAGVTVLNQTPSAF 731
Query: 246 KRLL----DSSSPLTLKRVLLGGSHIPVELAQMAATRGIDTWLG----YGMTEAASTVT- 296
++L+ D +L++V+ GG + + + R ++ YG+TE VT
Sbjct: 732 RQLIAAQDDKEQVHSLRQVIFGGEALETAMLKPWYARKVNASTQLVNMYGITETTVHVTY 791
Query: 297 -------AKRVDGLAGNGELLEHRELRLVD-----------GRIFIAGKTLAQGYYRQGQ 338
A+RV G + G+ + +L L+D G +++ G +A+GY + +
Sbjct: 792 YPLQPEDARRV-GASPIGKRIPDLQLYLLDAYGHPLPPGAVGELYVGGAGVARGYLNRDE 850
Query: 339 L-------VPLTNEQG--WFDSKDLGRW-QGNNLLIDGRADNLFISGGENVHCEEIEAVL 388
L P + G + S DLGRW +L GR D G + EIEA L
Sbjct: 851 LNTTRFLDDPFASAPGARMYRSGDLGRWLPDGSLEYLGRNDEQVKIRGFRIELGEIEARL 910
Query: 389 NQHPHVQVAIVIPVQDSEFGARPVAVIRSEAEWCQAIGDTWCQGKLEKFKWPIMYCLLPD 448
+ V+ A+V+ +D R VA + A Q TW + E+ + + +LP
Sbjct: 911 SACEGVRDAVVVVREDEPGDQRLVAYVIGTAG--QEPDATWLR---EQLRLSLAEHMLPS 965
Query: 449 ALL 451
A +
Sbjct: 966 AFV 968
Score = 77.0 bits (188), Expect = 1e-17
Identities = 108/427 (25%), Positives = 179/427 (41%), Gaps = 58/427 (13%)
Query: 19 PKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACTQV 78
P+ VA L + ++ + A L GV + V ++ + L T++ LA +
Sbjct: 3737 PEGVAAQVGEHCLHYGEMNHRANALAHHLISLGVGVDDRVAVMARRGLDTLVAMLAVLKA 3796
Query: 79 GALCAFLAPQPLARLQEKLATLYAEQSPKHLWLAPSCALSEEDITALNAHRLSLPDERDE 138
GA P + E++A L A+ +PK + L S TA P E +
Sbjct: 3797 GA---GYVPVDPSHPDERIAYLLADSAPKVV-LTQQALTSRVPETAAPVIAFDRP-EWPQ 3851
Query: 139 SVGGEKVSSQFSGEQLATLIFTSGSTGTPKAVAHTHQQ--HLV----SARGLLNKFAFTE 192
+ +V+ + LA +I+TSGSTG PK V H+ +L+ A GL +
Sbjct: 3852 RLENPQVAG-LNAAHLAYVIYTSGSTGQPKGVMVEHRTVGNLIDWHCQAFGL-------Q 3903
Query: 193 SDSWLLSLPLYHISGVA-ILYRWLAVGATLKIGTGDLQND---------IAGVTHASLVP 242
+ S S+ + +A ++ L GATL + D+ N+ IA + +P
Sbjct: 3904 AGSHTASVAGFGFDAMAWEVWPALCAGATLHLPPADVGNEQIDALLDWWIAQPLQVAFLP 3963
Query: 243 TQLKRLLDSS--SPLTLKRVLLGGSHIPVELAQMAATRGIDTWLGYGMTEAASTVTAKRV 300
T + S S TL+ +L+GG L Q G YG TEA T+ R+
Sbjct: 3964 TPVAEYAFSRNLSHPTLRTLLIGGD----RLRQFQRDPGFTVINNYGPTEATVVATSGRL 4019
Query: 301 --DGLAGNGELLEHRELRLVD-----------GRIFIAGKTLAQGYYRQGQLVP------ 341
DG G+ + + + L+D G +++AG+ +A+GY + ++
Sbjct: 4020 LPDGSLDIGKPITNTRVYLLDEHQQLVPLGVAGELYVAGEGVARGYLNRPEMTAERFLRD 4079
Query: 342 ---LTNEQGWFDSKDLGRWQGNNLL-IDGRADNLFISGGENVHCEEIEAVLNQHPHVQVA 397
+ + + DL RW + L GR D+ G V EIEA L+Q P ++ A
Sbjct: 4080 PFHCDADARMYRTGDLARWNADGTLDYLGRNDDQVKIRGLRVELGEIEAQLSQLPGIEEA 4139
Query: 398 IVIPVQD 404
+V+ +D
Sbjct: 4140 LVLARED 4146
Score = 75.5 bits (184), Expect = 4e-17
Identities = 128/502 (25%), Positives = 205/502 (40%), Gaps = 66/502 (13%)
Query: 10 LWQPWLERDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGE-VVTLVGKNH--L 66
L++ + P+ A H G +++ L+++ A+ L GV+ G+ V L+ ++H L
Sbjct: 2679 LFEAQVRAHPEACAAIHDGVAVSYAELNNRANRLARHLLGLGVQPGDSVAILLERSHDLL 2738
Query: 67 HTVLWFLACTQVGALCAFLAPQPLARLQEKLATLYAEQSPKHLWLAPSCALSEEDITALN 126
+ L L C V AP + R + A H ++ + D+ L
Sbjct: 2739 ASQLAVLKCAAVYVPLDVNAP--VERQSFMIEDSRARVLLTHSQVSLTTGAQRVDLDGLT 2796
Query: 127 AHRLSLPDERDESVGGEKVSSQFSGEQLATLIFTSGSTGTPKAVAHTHQQHLVSARGLLN 186
RL G + S E +A +++TSGSTGTPK V H+ +S + N
Sbjct: 2797 LERLK---------GTDLALPPQSSESVAYIMYTSGSTGTPKGVLVPHR--AISRLAINN 2845
Query: 187 KFA-FTESDS-WLLSLPLYHISGVAILYRWLAVGATLKIGTGDLQNDIAGVTHASLVPTQ 244
+A F D S P + S + + L G + IG DL ++ + L+ Q
Sbjct: 2846 GYADFNAQDRVAFASNPAFDASTLDVWAPLLNGGCVVVIGQHDL---LSPLNFQRLLLEQ 2902
Query: 245 LKRLLDSSSPL-------------TLKRVLLGGSHI-PVELAQMAATRGIDTWL-GYGMT 289
+L ++ L L+ +++GG + P + ++ A L GYG T
Sbjct: 2903 SVSVLWMTAGLFHQYASGLGEAFSRLRYLIVGGDVLDPAVIGRVLANNPPQHLLNGYGPT 2962
Query: 290 EAASTVTAKRVDGLAGNGEL-----LEHRELRLVD-----------GRIFIAGKTLAQGY 333
E A+T +A GNG + + + L ++D G ++I G+ +A+GY
Sbjct: 2963 E-ATTFSATYEIVSVGNGSIPIGKPVGNSRLYVLDNQGQPAPLGVGGELYIGGQGVARGY 3021
Query: 334 YRQGQLVPLTNEQGWFDSK---------DLGRWQGN-NLLIDGRADNLFISGGENVHCEE 383
+ +L FDS DL RW+ + NL GR D G V E
Sbjct: 3022 LHRDELTLEKFVADPFDSDPQARLYRTGDLVRWRADGNLEYLGRNDEQVKIRGFRVELGE 3081
Query: 384 IEAVLNQHPHVQVAIVIPVQDSEFGARPVA-VIRSEAEWCQAIGD--TWCQGKLEKFKWP 440
IEA L +H V+ A+V+ QD+ R VA V + E I + QG L + P
Sbjct: 3082 IEARLAEHAEVREAVVLCRQDAPGDKRLVAYVTAQQPETALDIEHLRSHLQGLLPDYMVP 3141
Query: 441 IMYCLLPDALLDGGIKVSRAAV 462
Y L L K+ R A+
Sbjct: 3142 AAYVQLDSLPLTANGKLDRKAL 3163
Score = 62.4 bits (150), Expect = 4e-13
Identities = 110/471 (23%), Positives = 182/471 (38%), Gaps = 71/471 (15%)
Query: 10 LWQPWLERDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTV 69
L++ P +A+++ GQ L++ L+ A L +G+ + + V + + L +
Sbjct: 1582 LFEAQAAAQPDSMAVTYEGQHLSYAELNQWANQIAHRLIAEGIGADDRVAICVERGLEMI 1641
Query: 70 LWFLACTQVGALCAFLAPQPLARLQEKLATLYAEQSPKHLWLAPSCALSEEDITALNAHR 129
+ + GA L P + +E+LA + + +PK L L E A
Sbjct: 1642 AGLVGILKAGAGYVPLDP---SYPEERLAYMLEDSAPKMLLTQRD--LRERFAQAAMPVL 1696
Query: 130 LSLPDERDESV--GGEKVSSQFSG---EQLATLIFTSGSTGTPKAVAHTHQ-----QHLV 179
L D R E+ + Q +G + LA LI+TSGSTG PK VA H H
Sbjct: 1697 LLEADARAENAIDSAPTTNPQLAGLNAQHLAYLIYTSGSTGQPKGVAMPHAPLVNLMHWQ 1756
Query: 180 SARGLLNKFAFTESDSWLLSLPLYHISGVAILYRWLAVGATLKIGTGDLQNDIAGVTHAS 239
A+ + ++ L L ++ L G L + D++ D +
Sbjct: 1757 IAQTVEHR---RPRQRTLQFAALGFDVAFQEIFSTLCAGGELSLIHSDMRLDFRRL-FQH 1812
Query: 240 LVPTQLKRLLDSSSPL-TLKRVLLGGSHIPVELAQMAATRGIDTWL-------------- 284
+ +++RL L L ++ P L Q T G +
Sbjct: 1813 ICEQRIERLYMPCIALQALAEAVVAEPEQPECLLQDVITAGEQLRITEPMRHFFARLNDA 1872
Query: 285 ----GYGMTEAASTVTAKRVDG-------LAGNGELLEHRELRLVD-----------GRI 322
YG TE + VTA ++G L G+ + + + L+D G +
Sbjct: 1873 RLHNHYGPTE-SHVVTAMTLEGNPQAWPTLPSIGQPVANTRIYLLDEHMRPVPVGVAGEL 1931
Query: 323 FIAGKTLAQGYYRQGQLVP--------LTNEQG-----WFDSKDLGRWQGN-NLLIDGRA 368
+I G +A+GY + L T E G + + DLG WQ + N++ GR
Sbjct: 1932 YIGGVCVARGYLNRDDLTADRFIADPFATREDGNPCARLYKTGDLGCWQDDGNIIYMGRN 1991
Query: 369 DNLFISGGENVHCEEIEAVLNQHPHVQVAIVIPVQDSEFGARPVAVIRSEA 419
D+ G + EIEA L Q+P ++ A V+ +D R VA +A
Sbjct: 1992 DDQIKIRGFRIELGEIEARLGQYPGLRDAAVLAREDVPGEKRLVAYFSVQA 2042