Pairwise Alignments

Query, 476 a.a., o-succinylbenzoate--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., medium-chain-fatty-acid--CoA ligase AlkK from Phaeobacter inhibens DSM 17395

 Score = 95.9 bits (237), Expect = 3e-24
 Identities = 122/503 (24%), Positives = 211/503 (41%), Gaps = 73/503 (14%)

Query: 27  AGQT--LTWQVLDSQVAHYAKALREQGVRSG-EVVTLVGKNHLHTVLWFLACTQVGALCA 83
           +G+T  +TW  +D+     A AL   G+  G    T+   N  H  ++F   +  G +C 
Sbjct: 34  SGETEHVTWGDIDANARKLAAALGRLGIAQGARCGTIAWNNRRHLEIYF-GVSGGGYVCH 92

Query: 84  FLAPQPLARLQ-EKLATLYAEQSPKHLWL----APSCALSEEDITALNAHRLSLPDERDE 138
            + P    RL+ E+L  +      + L++     P+ A      T +    +  P + D 
Sbjct: 93  TINP----RLKPEQLIYIINHAEDQVLFIDTTFVPAVAQLRAQFTTVQHIVVMGPKDADI 148

Query: 139 SVGGEKV-------SSQFSG-------EQL-ATLIFTSGSTGTPKAVAHTHQQHLVSARG 183
           +   E V        ++ +G       E L ++L +TSG+TG PK V +TH+  ++   G
Sbjct: 149 AAQIEGVLFYDDVLDAEAAGYDWPDLDENLPSSLCYTSGTTGNPKGVEYTHRTSVLHTIG 208

Query: 184 --LLNKFAFTESDSWLLSLPLYHISGVAILYRWLAVGATLKIGTGDLQN-------DIAG 234
               +  A    D+ L  +P++H++     Y   AVGA L +    L         D   
Sbjct: 209 GNQPDGLALRARDTVLAVVPMFHVNAWGTPYMTAAVGAKLVLPGPHLDGVSLARLIDAEK 268

Query: 235 VTHASLVPTQLKRLLDSSSPL-----TLKRVLLGGSHIP-VELAQMAATRGIDTWLGYGM 288
           VT A  VPT    LL           +L+R ++GGS +P V +       G+D    +GM
Sbjct: 269 VTVALGVPTIWMGLLQGLEETGCTAESLERTIVGGSALPTVMIPTFRDKYGVDLVHAWGM 328

Query: 289 TEAASTVTAKRV-------DGLA------GNGELLEHRELRLVD-------------GRI 322
           TE +   T  ++       D  A      G G  +   +LR+VD             G +
Sbjct: 329 TETSPIGTLNQLLQKHNELDAEAQAKLREGQGRPMYGIDLRIVDDSGAVLPHDGETQGNL 388

Query: 323 FIAGKTLAQGYYRQGQLVPLTNEQGWFDSKDLGRWQGNN-LLIDGRADNLFISGGENVHC 381
            I G  +   Y+R G+      + GWFD+ D+     +  ++I  R+ ++  SGGE +  
Sbjct: 389 QICGHWVIDSYFRAGETA--LTDDGWFDTGDVATIDDDGYMIIRDRSKDIIKSGGEWIST 446

Query: 382 EEIEAVLNQHPHVQVAIVIPVQDSEFGARPVAV-IRSEAEWCQAIGDTWCQGKLEKFKWP 440
            E+E +   HP++  A  I  +  ++  RPV + ++   +  +A      QGK+  ++ P
Sbjct: 447 VELEDIAMSHPNIAQAAAIAAKHPKWDERPVVIAVKRSGDVTEADLLAHYQGKVASWQIP 506

Query: 441 IMYCLLPDALLDGGIKVSRAAVK 463
                +    L G  KV +  ++
Sbjct: 507 DRVIFVESLPLGGTGKVQKNTLR 529