Pairwise Alignments

Query, 476 a.a., o-succinylbenzoate--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 109/471 (23%), Positives = 190/471 (40%), Gaps = 87/471 (18%)

Query: 16  ERDPKQVALSHAGQTL--TWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFL 73
           ++DP +  L +  + L  T++  D +    AK L E G++ G+ + +  +N    + +  
Sbjct: 17  QKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMF 76

Query: 74  ACTQVGALCAFLAPQPLARLQEKLATLYAEQSPKHLWLAPSCALSEEDITALNAHRLSLP 133
           A  ++G +   L     A    +LA +  +   K L +  S      D+  L      +P
Sbjct: 77  ATAKIGVV---LVTVNTAYKSHELAYVMKQSDMKALAIIDSF----RDVNYLEILYELVP 129

Query: 134 DERDES-----------------VGGEKVSSQFSGEQLATL------------------- 157
           + +                    VG EK    ++  +L  L                   
Sbjct: 130 ELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLDSD 189

Query: 158 -----IFTSGSTGTPKAVAHTHQQHLVSARGLLNKFAFTESDSWLLSLPLYHISGVAI-L 211
                 +TSG+TG PK V  TH+  L +   +  K  FTE +   L +PL+H  G+ + +
Sbjct: 190 DVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGV 249

Query: 212 YRWLAVGATL-KIGTGDLQNDIAGV-----THASLVPTQLKRLLDSSSPL-------TLK 258
              L  G TL  +   D    +A +     T    VPT    + + S P+       +L+
Sbjct: 250 LALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMF--IAEFSHPMFEMFDLSSLR 307

Query: 259 RVLLGGSHIPVELAQ--MAATRGIDTWLGYGMTEAASTVTAKRVDG-----LAGNGELLE 311
             ++ GS  P+E  +  M+     +  + YG+TEA+   T   VD      +   G+ + 
Sbjct: 308 TGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRVESVGKAMP 367

Query: 312 HRELRLVD------------GRIFIAGKTLAQGYYRQGQ-LVPLTNEQGWFDSKDLG-RW 357
           H E++++D            G I   G  + +GYY+  +    +  + GW  S DL    
Sbjct: 368 HCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVED 427

Query: 358 QGNNLLIDGRADNLFISGGENVHCEEIEAVLNQHPHVQVAIVIPVQDSEFG 408
           +     I GR  ++ I GGEN++  EIE  L   P +  A V+ + D ++G
Sbjct: 428 EDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYG 478