Pairwise Alignments

Query, 181 a.a., XRE family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 201 a.a., Helix-turn-helix motif protein from Pseudomonas syringae pv. syringae B728a

 Score = 52.0 bits (123), Expect = 7e-12
 Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 19/164 (11%)

Query: 13  QLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEASFSAFFAND 72
           Q+K  R+++ L L   A++ G+S+ ML +IE  + S ++  L ++   L    S  F+  
Sbjct: 20  QIKRQRQAQELKLADVARIAGISQGMLSKIENAQVSTSLDNLSRLCDVLGMPMSKLFSQY 79

Query: 73  PQLLSSERSFPDDLNMKI---------------HTLFPYAADTGLEIFEITLLDHHQQMS 117
            Q  SS      D  +++               HT  P       E + +T+ D  ++  
Sbjct: 80  DQQGSSALLVKADEGLEVVRRGTEKGHTYHLLNHTRGP---KKSFEAYMVTMDDASEEFP 136

Query: 118 SPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHG 161
           +    G  E++H+LEG +      Q + +Q G+ + F  D PHG
Sbjct: 137 TFSHPGT-EFLHLLEGELIYRHGNQLYPMQAGDSLTFDGDIPHG 179