Pairwise Alignments

Query, 181 a.a., XRE family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 189 a.a., DNA-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 16/190 (8%)

Query: 5   MFKSQIANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEAS 64
           M   ++  +++  R+ RG+S +  ++  G++   +  +E     P+I  L K+A  L   
Sbjct: 1   MAAEKLGARVRKYREDRGMSREQLSEAAGLTVEFIAALEEDNLYPSIGPLQKVARALNVR 60

Query: 65  FSAFF----ANDPQLLSSERSFPDDLNM----------KIHTLFPYAADTGLEIFEITLL 110
              F       DP +++       DL M          + H+L    +D  +E F I + 
Sbjct: 61  LGTFMDDEVTKDP-IVARRGDREADLTMQKARNKRAAFRFHSLGKGKSDRNMEPFFIEIC 119

Query: 111 DHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAV-TEKA 169
              ++     +    E+I V +G ++V + ++   L+ G+ I + S  PH   A   + A
Sbjct: 120 PEPEEDRKLSSHQGEEFILVTKGRVRVVYGKEEQVLEPGDTIYYNSIVPHYVGAEGDDPA 179

Query: 170 VFQNIVAYPR 179
               ++ YPR
Sbjct: 180 EIYAVIYYPR 189