Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  176 bits (447), Expect = 2e-48
 Identities = 116/351 (33%), Positives = 177/351 (50%), Gaps = 2/351 (0%)

Query: 300 LLDFIAELEELADSKVEQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSPI 359
           ++D +  + +  D ++ + A      +  A +     I++A +  LLLG  +   I  PI
Sbjct: 178 VMDQLTIMIDSNDRQISEDAKAATQQEVTAKTVLYSGIVVAFIAALLLGMFISRLISRPI 237

Query: 360 QRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTA 419
               +    I++G  DLT  +   ++DE G+L K+       ++  I  I  +++   +A
Sbjct: 238 AVAVDCAQRIAQG--DLTQHITSNSRDEAGQLLKALGDMQTSLKTTIQQIASASDQLASA 295

Query: 420 AVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQST 479
           A +L+A     + A+ +Q  E+   + A T MT+   +V   A   SQ+  +    A   
Sbjct: 296 AEELTAVTDDGSRALIRQNDEIQQAATAVTEMTSAVEEVARNAVSTSQASQSTSSQASEG 355

Query: 480 LSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEA 539
               R A Q++N    E+T  T  +  L   V  I  VL  I GIAEQTNLLALNAAIEA
Sbjct: 356 RDQARSAVQAINTATQEITSSTGLVKDLAVQVRDIGKVLDVIRGIAEQTNLLALNAAIEA 415

Query: 540 ARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTT 599
           ARAGEQGRGFAVVADEVR+LA RTQ ST  I+  I  ++  AD +V  +  S    T+T 
Sbjct: 416 ARAGEQGRGFAVVADEVRALAARTQASTGEIESMIHAVQDRADSAVDAMGKSQALVTETQ 475

Query: 600 EITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQAL 650
           ++     E+L Q+A  IS++   N   + A   Q      +  +L ++Q L
Sbjct: 476 DLARATGEALEQIADNISQINDRNLVIATASEEQAHVAREVDRNLVNIQDL 526



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 4/110 (3%)

Query: 384 TQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNT 443
           TQ   GE+    +  I  +Q+       +   ++    +     + T EA+ +    ++ 
Sbjct: 439 TQASTGEI----ESMIHAVQDRADSAVDAMGKSQALVTETQDLARATGEALEQIADNISQ 494

Query: 444 ISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNEL 493
           I++    +   S +    ARE+ ++++NI   +  T +   Q   S  EL
Sbjct: 495 INDRNLVIATASEEQAHVAREVDRNLVNIQDLSTQTAAGANQTNASSQEL 544