Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  186 bits (473), Expect = 2e-51
 Identities = 114/359 (31%), Positives = 189/359 (52%), Gaps = 4/359 (1%)

Query: 330 ISSFKVLIIIALLV----LLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQ 385
           +S F+   +IA+ V    + LL  +L+  ++ P+  +   + DI++G GDLT R+ +  +
Sbjct: 268 LSQFRTSALIAMFVAVAAIALLLSLLIQVLMRPLTTMGRAMQDIAQGEGDLTRRLVVQGK 327

Query: 386 DEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTIS 445
           DEF  LG SF++F+E+I   I++++ +T      +  +  +   +    ++Q+   N+++
Sbjct: 328 DEFAVLGGSFNQFVERIHASISEVSSATRQVHDLSQRVMTSSNASLVGSDEQSARTNSVA 387

Query: 446 NATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETIN 505
            A   + A + ++   A + SQ      + A      V +  Q++ EL  +++     I 
Sbjct: 388 AAINQLGAATQEIARNAADASQHASGASEQADDGRQVVEKTIQAMTELSQKISLSCTQIE 447

Query: 506 SLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQG 565
           +L     +I  +L  I GI++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ 
Sbjct: 448 TLNASTDNIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQE 507

Query: 566 STNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQ 625
           S   I + IT L+  + E+V  +N S     ++ E+ +QA   L  V   I  +  MNQ 
Sbjct: 508 SAEEIHKMITSLQVGSREAVTTMNASQTSSEESVEVANQAGLRLVSVTQRIGEIDGMNQS 567

Query: 626 TSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
            + A   Q   V ++   +SH+  L Q +   + ++     AL  +   L   +  FKI
Sbjct: 568 VAAATEEQTAVVETLNMDVSHINLLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI 626