Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  189 bits (479), Expect = 5e-52
 Identities = 109/348 (31%), Positives = 187/348 (53%), Gaps = 1/348 (0%)

Query: 337 IIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSFD 396
           ++IA + LL++ W++ + I  P++++   + DI++G GDLT R+     DE G + + F+
Sbjct: 366 LVIAGIGLLVI-WLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIARGFN 424

Query: 397 KFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAISS 456
            F+ K+Q +I  +  S      ++   +     T + V+KQ  E++ ++ A   MTA + 
Sbjct: 425 TFLSKLQGMITQVVTSVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTATAQ 484

Query: 457 QVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIEP 516
            V   A + +Q+  + D+ A   +  VR  + S+  L  E+ +    + +L     +I  
Sbjct: 485 DVARNATQAAQAASHADQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENINA 544

Query: 517 VLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSITQ 576
           +L  I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ +T  IQ  I Q
Sbjct: 545 ILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQTMIQQ 604

Query: 577 LRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQS 636
           L+    + VRV+ +S  +  ++ +  ++A ++L  +   +S +  MN Q + A   Q   
Sbjct: 605 LQQGTRDVVRVMEDSQTRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQSAV 664

Query: 637 VTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
              I  ++ ++  +         +S    + L    E     +++F++
Sbjct: 665 ADDINRNVINIGQVANEVASGADESSAASAGLTKLAEQQRRLINQFRV 712