Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  198 bits (504), Expect = 6e-55
 Identities = 121/361 (33%), Positives = 190/361 (52%), Gaps = 6/361 (1%)

Query: 329 AISSFKVLIIIALL-----VLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNIT 383
           A++SF+   ++A L     +LLLLG +L+  ++ P+  +   + +I+EG GDLT R+ + 
Sbjct: 270 ALASFRTSAVVAALTAVGVILLLLG-MLMRVLMRPLTDMGRAMANIAEGEGDLTRRLAVQ 328

Query: 384 TQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNT 443
           ++DEFGEL  +F++F+E+I   I +++ +T      A  + A    +    ++Q    N+
Sbjct: 329 SKDEFGELASAFNRFVERIHTSIREVSSATQQVNEVAARVLAASNSSMANSDEQASRTNS 388

Query: 444 ISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTET 503
           ++ A   + A + ++   A + SQ        A+     V Q   ++ EL A+++     
Sbjct: 389 VAAAINELGAAAQEIARNAADASQQASGARHQAEDGRQVVEQNIAAMRELSAKISASCAQ 448

Query: 504 INSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRT 563
           I +L      I  +L  I GI+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RT
Sbjct: 449 IEALNAKTVDIGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRT 508

Query: 564 QGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMN 623
           Q S   IQQ I QL+  A  SV+ +  S  +   +  I  +A E L +V   I  +  MN
Sbjct: 509 QSSAQEIQQMIEQLQVGAGASVQTMTESQRQSESSVSIADRAGERLGEVTQRIGEIDGMN 568

Query: 624 QQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFK 683
           Q  + A   Q   + S+   ++ +  L Q   E +Q +      L  +   L   +  F+
Sbjct: 569 QSVATATEEQTAVIESLNMDITEINTLNQQGVENLQSTLRACGDLDQQARRLKQLVDSFR 628

Query: 684 I 684
           I
Sbjct: 629 I 629