Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  194 bits (494), Expect = 9e-54
 Identities = 110/357 (30%), Positives = 192/357 (53%), Gaps = 3/357 (0%)

Query: 331 SSFKVLIIIALLVL---LLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDE 387
           S+   +++I +L+    LL  W++  +I  P++ +   + +IS+G GDLT R+NI +++E
Sbjct: 353 SNLAAMLVIGMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLTQRLNIDSRNE 412

Query: 388 FGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNA 447
            G++   F+ F+ ++Q +I+++  S      A+   +     T + V  Q  E+  ++ A
Sbjct: 413 LGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQLAEIELVATA 472

Query: 448 TTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSL 507
              MTA +  V   A + +++  N D+ A      V+    ++ EL +E+ +  + + +L
Sbjct: 473 VHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIGRAVDVVQTL 532

Query: 508 KNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGST 567
                +I+ +L  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ +T
Sbjct: 533 ARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQAT 592

Query: 568 NTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTS 627
             IQQ I QL+    + V+V+  S  +  ++ E    A E+L  +   +S +  MN Q +
Sbjct: 593 GEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVSLINDMNNQIA 652

Query: 628 EAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
            A   Q      I  +++++  + Q       ++    + L    E     +++F++
Sbjct: 653 SAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRRLINQFRV 709