Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  179 bits (453), Expect = 4e-49
 Identities = 110/348 (31%), Positives = 188/348 (54%), Gaps = 6/348 (1%)

Query: 342 LVLLLLGWILV-----NQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSFD 396
           L+LL++G +++     + I+  I  ++  +  ++E   DL+  V I  +DE G +G +F+
Sbjct: 193 LLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAEDE-DLSRSVAIGAKDEIGAMGDAFN 251

Query: 397 KFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAISS 456
           + I K ++ +  +   T+     +  +S   + T  AVN+Q  E + +++A   M+A   
Sbjct: 252 RMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMNEMSATVQ 311

Query: 457 QVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIEP 516
           +V   A + + +    D  +++ +    +A   +  L+AE+ +  + I  +++   SI+ 
Sbjct: 312 EVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVESDSASIDM 371

Query: 517 VLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSITQ 576
           VL  INGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ ST  IQ  I Q
Sbjct: 372 VLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEEIQAMIEQ 431

Query: 577 LRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQS 636
           L+S    +V+ +  + L+    ++   +A +SL  +A E+  + +MN Q + A   Q   
Sbjct: 432 LQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATAAEQQSAV 491

Query: 637 VTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
              I  ++S +  +  +      Q+      L     +L   + +FK+
Sbjct: 492 AEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539