Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  206 bits (525), Expect = 2e-57
 Identities = 125/355 (35%), Positives = 197/355 (55%), Gaps = 5/355 (1%)

Query: 330 ISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFG 389
           +S+F +L+++ALL + +      N +LSP+  ++  + D+++G+GDLT R+ IT+QDE G
Sbjct: 235 VSAFALLVLMALLAIFMS-----NALLSPLLLIKRNLDDMAQGDGDLTQRLPITSQDELG 289

Query: 390 ELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATT 449
           EL  SF++F+EKI +L+  +  +T         +++  + + +A+  Q  E + ++ A  
Sbjct: 290 ELAMSFNRFVEKIHSLVQQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVATAIN 349

Query: 450 AMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKN 509
            M+A + +V   A+  +++    D+   +    V Q+ + ++ELV E+    E++  L+ 
Sbjct: 350 EMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESLEGLQQ 409

Query: 510 HVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNT 569
            V  I  VL  I  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+RTQ ST  
Sbjct: 410 DVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTGE 469

Query: 570 IQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEA 629
           IQ  I +L+S+   +V  +  +  KG  T +  +QA ESL  ++  I  +  MN Q + A
Sbjct: 470 IQGMIDRLQSATSNTVSTMLRAGEKGESTRDQANQAGESLDAISALIGTINSMNAQIAAA 529

Query: 630 ITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
              Q      I  S+ H+            Q   T   L    E L   + +F+I
Sbjct: 530 AEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTSRELNGLAERLQKLVGQFRI 584