Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  192 bits (487), Expect = 5e-53
 Identities = 118/354 (33%), Positives = 191/354 (53%), Gaps = 1/354 (0%)

Query: 331 SSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGE 390
           S+    +I  +L++LLLG +L++ +L P+  +   + DI+ G GDLT R+ I +QDEFG 
Sbjct: 277 SAIVATVIAVVLIILLLG-MLLSVLLRPLNLMGRAMHDIAAGEGDLTKRLVIESQDEFGH 335

Query: 391 LGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTA 450
           LG  F+ F+E+I + + ++  ST      A+ +      +    ++Q+   N+++ A   
Sbjct: 336 LGNGFNLFVERIHDSMREVASSTVQLNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINE 395

Query: 451 MTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNH 510
           + A + ++   A   S    +    A      V Q  ++++ L   ++  +  I +L   
Sbjct: 396 LGAATQEIAQNAARASGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTK 455

Query: 511 VTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTI 570
             +I  +L  I GI++QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA RTQ S + +
Sbjct: 456 TANIGQILDVITGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAHRTQESASQV 515

Query: 571 QQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAI 630
           Q+ I QL+S A E+V ++N+S  +  +T  I ++A  SL  V   I  +  MNQ  + A 
Sbjct: 516 QEMIEQLQSGAREAVSIMNDSQRESVETVGIANKAVASLEHVTERIGEIDGMNQSVAAAT 575

Query: 631 THQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
             Q   V +I   ++ +  L Q   E +  +    + L+ +   L   +  F+I
Sbjct: 576 EEQTAVVEAINVDITEINTLNQQGVENLNATLRACTDLEQQSTRLTQLVGSFRI 629