Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  179 bits (455), Expect = 3e-49
 Identities = 149/549 (27%), Positives = 256/549 (46%), Gaps = 27/549 (4%)

Query: 138 SYKNYIETKKSYDKATQVLVDFGEKLETLGDSAVEELEREPNRNITWQSDVMERWQAAD- 196
           ++   ++  +  D+A Q L+   E++    ++ +++   + +R++  QS + +   A D 
Sbjct: 119 TFSQLVDNNRQIDQAMQPLITISEQVSGSFETLLQKTFDDVSRSLD-QSGIDQVKIAGDL 177

Query: 197 -GGMESNIGLLWKLYYTQRLLDGQDDATQIKAIEQAIGFQKQANSEMFSTGRFTISAGEE 255
             GM +N  L+++ Y +  +   ++      A +  I     A +++ +           
Sbjct: 178 RNGM-TNFRLVFRRYIS--IPTAENRQITFDAADSLIAQVGSARNQLPNKA--------- 225

Query: 256 WKNASYEEVFSQLNSQHEQAMMAVIESYRNYRQIYQEYTVTSLALLDFIAELEELADSKV 315
               + +E  + L  Q++  M+++ +  +   QI       S+   D +   E+L    +
Sbjct: 226 --GPAVDEALAALQ-QYKSLMVSISQLMQQNDQIRDSLRQQSM---DIVTSAEKL----M 275

Query: 316 EQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGD 375
             Q V     +  A++    + +I LL+ +    ++  QI  P+         I++G  D
Sbjct: 276 AGQVVSANKEKDSAVTQLLTVAVIVLLLGIFAAILITRQITRPLDSTVIAARRIADG--D 333

Query: 376 LTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVN 435
           LT  ++ T QDE G L  +       ++ LI  I+       TAA +LSA  + T+  V 
Sbjct: 334 LTNDLSTTRQDELGLLQNTMQHMTVSLRTLIGGISNGVTQIATAAEELSAVSEQTSAGVT 393

Query: 436 KQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVA 495
           +Q  EV+ ++ A   M +   +V     + SQ+       A    S V+ A + +++L  
Sbjct: 394 QQKLEVDQVATAMNQMASTVQEVAQNTEDASQAARQASDRAAHGSSVVQHATREISQLAG 453

Query: 496 EVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 555
           EV Q  E +  L      I  V+  I  +AEQTNLLALNAAIEAARAGEQGRGFAVVADE
Sbjct: 454 EVGQLGEAMQRLIQDSDKIGGVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADE 513

Query: 556 VRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIE 615
           VRSLA RTQ ST  I+  I  L+     +  ++N S  +   T  +  QAEESL ++   
Sbjct: 514 VRSLAQRTQSSTTEIEALIKSLQDGTGAASELMNASRQRTEGTVALARQAEESLLEITHS 573

Query: 616 ISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDL 675
           I  + QM+QQ S A   Q      I  S+  ++ +   +    +QS  +   L     +L
Sbjct: 574 IVTIEQMSQQISAAAEEQSAVTDEINRSVISVRDIADQSATATEQSAASTVELARLGSNL 633

Query: 676 ALKMSKFKI 684
              +++F+I
Sbjct: 634 QDMVARFRI 642