Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  183 bits (465), Expect = 2e-50
 Identities = 138/484 (28%), Positives = 236/484 (48%), Gaps = 26/484 (5%)

Query: 214 RLLDGQDDATQIKAIEQAIGFQKQANSEMFSTGRFTISAGEEWKNASYEEVFSQLNSQHE 273
           RLLD +D AT  K + Q+I  + +   ++++  R T    +E               Q++
Sbjct: 72  RLLDAKDKATAEK-MRQSINGELERAQKVYAIYRATPLEDDE----------RAAGDQYD 120

Query: 274 QAMMAVIESYRNYRQIYQEYTVTSLA-LLDFIAE---------LEELADS---KVEQQAV 320
             M A + + +N   + Q   +      L+ +AE         L+ + DS   ++++ A 
Sbjct: 121 ALMPAYMSASQNIFDLQQAGKLEDARNRLNALAEGEFNKARGYLQIMIDSNKRQIKEGAE 180

Query: 321 LILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRV 380
                Q+ ++      I+IA +V ++LG ++   I  P++   E    I+  +GDLT  V
Sbjct: 181 AADRLQSTSVFMLTAGIVIAFVVAIMLGILITRMITRPLRSAIEVAQRIA--SGDLTQSV 238

Query: 381 NITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFE 440
           + T  DE G L  +       ++  I +I+ +++   +AA +L A  + +   + +Q  E
Sbjct: 239 SSTRGDEAGHLLNAIGTMQGNLKRTIQEISSASDQLASAAEELGAVTEESTRGLTRQNDE 298

Query: 441 VNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQG 500
           +   + A   MTA   +V   A   S+   ++  +A +    V    + +  +V+E+T+ 
Sbjct: 299 IQQAATAVNEMTAAVEEVARNAVSTSEESKSLATDAANGRGQVDNTVKGIGTMVSEITES 358

Query: 501 TETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 560
           T ++ +L  HV  I  VL  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA
Sbjct: 359 TGSVTTLAGHVRDISKVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA 418

Query: 561 TRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLT 620
            RTQ ST  I+  I  ++S AD +V  ++ S+   T T E+  +A  +L ++   +  + 
Sbjct: 419 HRTQASTVEIEGMIGTVQSGADGAVAAMSKSLATATNTQELAQRAGSALEKITSGVGMIN 478

Query: 621 QMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMS 680
           + N   + A   Q Q    +  +L ++Q L   +     Q+  +   L          ++
Sbjct: 479 ERNMVIASASEEQAQVAREVDRNLVNIQELSAQSAAGANQTSASSQELSRLATSFNTMVA 538

Query: 681 KFKI 684
           +FK+
Sbjct: 539 QFKL 542