Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  196 bits (499), Expect = 2e-54
 Identities = 114/354 (32%), Positives = 193/354 (54%), Gaps = 1/354 (0%)

Query: 331 SSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGE 390
           S+   ++++ ++++LLLG +L+  ++ P+ ++   + DI++G GDLT R+ IT+QDEFGE
Sbjct: 277 SAITAMVVVVVVIILLLG-LLIRVLMQPLHQMGRAMRDIADGEGDLTKRLAITSQDEFGE 335

Query: 391 LGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTA 450
           L +SF++F+E+I   I ++  +       A  +      +    ++Q     +++ A   
Sbjct: 336 LAESFNRFVERIHTSIREVASTAAQLGEVATRVVKVSNASMGNSDQQANRTESVAAAINE 395

Query: 451 MTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNH 510
           + A + ++   A   SQ   +    A    + V+Q  +++NEL  ++++    I SL   
Sbjct: 396 LGAAAQEIAQNAARTSQQSSDASGLASDGQNVVQQTIKAMNELSGKISESCVNIESLNGK 455

Query: 511 VTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTI 570
             +I  +L  I  I++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ S   +
Sbjct: 456 TANIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQDSAQQV 515

Query: 571 QQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAI 630
           Q  I +L+  A ++V  +  S  +   +  I + A E L  V   I  +  MNQ  + A 
Sbjct: 516 QTMIEELQVGARDAVTNMTESQRQSEDSVGIANLAGERLGSVTRRIEEINGMNQSVAAAT 575

Query: 631 THQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
             Q   V SI   ++H+  L Q   + ++Q+    ++L+ +   L   +  F+I
Sbjct: 576 EEQTSVVESINVDITHINTLNQLGVDNLRQTLEACNSLEEQAARLQQLVGSFRI 629