Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 661 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  174 bits (440), Expect = 2e-47
 Identities = 159/664 (23%), Positives = 302/664 (45%), Gaps = 42/664 (6%)

Query: 14  MRVKTKILVTFSVVGILVTALGIWTIKTMYSSSSGLSYIVGPAWDTADGAMETTIQIEAQ 73
           M +  +++  F+V+ +L+ A+   + ++ +S S  +S I G +   +  A E  + +   
Sbjct: 1   MTILQRVIGGFAVLVLLLLAMAGISYQSTHSISDRISVITGQSAPLSRAASELYVHVLRA 60

Query: 74  MLAVNRLILGEDSQRVE---QILNTAITD----VDTSSSRMIEAGLLSAAQTQQFSQFNS 126
             A+  +++  D ++++   Q  N ++T     +D++ + + +   L     QQ  Q ++
Sbjct: 61  NQALLGILVSTDPKQIDDGKQPFNDSMTRFNQLLDSTPAYIGDRAELRDNLNQQ-RQLSA 119

Query: 127 QYQQSRNTLITSYKNYIETKKSYDKATQVLVDFGEKLET-LGDSAVEELEREPNRNITWQ 185
            Y +   TLI S++ ++                G +L   L D    E        +   
Sbjct: 120 AYAEQAQTLIASHRQHVLQALQSRVLQGYSSSQGAQLTGYLRDYIARERNAGSAETVAAG 179

Query: 186 SDVMERWQAADGGMESNIGLLWKLYYTQRLLDGQDDATQIKAIEQAIGFQKQANSEMFST 245
             ++     +  G+ ++      +   QR+L+ QD+    +  E      +         
Sbjct: 180 EKLLLDVGKSYEGLAAHAATP-NIQTLQRVLNLQDEVISTRTRELIAADPRAGRIASVMV 238

Query: 246 GRFTIS-AGEEWKNASYEEVFSQLNSQHEQAMMAVIESYRNYRQIYQEYTVTSLALLDFI 304
            R      G +    +Y +  +      +Q   A         +I  E+   SLA+ +  
Sbjct: 239 NRLLNDLTGSDGVYQAYRQEAALAEQVDKQRQAAETRLQATLGKI-GEFGNQSLAVAN-- 295

Query: 305 AELEELADSKVEQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQE 364
            E +  ADS +     L+L           +  ++A++   ++G  +   +  P+   +E
Sbjct: 296 -EAKAGADSTIATSLSLLL-----------IACLLAVMAAAIIGTWVAFSLRRPLAAFRE 343

Query: 365 RVTDISEGNGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLS 424
            +  ++  +GD+ +R +++ +DEFGELG   ++F + +Q     +  S +     A   +
Sbjct: 344 VLKTLT--SGDMRVRFDVSRRDEFGELGGYLNEFTQSLQQTFRQLIGSADTLALTASQNA 401

Query: 425 ATFKVTAEAVNKQTFEVNTISNATTAMTAISSQVISGAREI-------SQSVLNIDKNAQ 477
              + T   V++Q   +N+ ++A   M +   +V   A++        S+    + K   
Sbjct: 402 QISEQTTRVVDEQKDRLNSAASAMNEMESTVEEVARRAQDTRGAVDSTSELTGKVQKRVA 461

Query: 478 STLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAI 537
            T+ N+RQ A+ VN+  A         + L+ +  +I+ ++  I  IAEQTNLLALNAAI
Sbjct: 462 ETIVNIRQQAEQVNKASA-------VTDELQKYGQNIDGIVDAIRTIAEQTNLLALNAAI 514

Query: 538 EAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQ 597
           EAARAGEQGRGFAVVADEVRSLA+RTQ ST+ IQ+ I Q++S    +V V+N S ++   
Sbjct: 515 EAARAGEQGRGFAVVADEVRSLASRTQTSTSEIQEMIGQMQSKIHSAVEVMNESQIQSDH 574

Query: 598 TTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEK 657
              + S A++ L ++   +  +  MN Q + A   Q  +V   +  ++H+    Q A + 
Sbjct: 575 CVTLASGADQLLVEMGEAVDVIRDMNIQIAAATEQQSATVQETSRMVTHINDSAQQAADG 634

Query: 658 IQQS 661
            +QS
Sbjct: 635 AEQS 638