Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  165 bits (417), Expect = 7e-45
 Identities = 109/349 (31%), Positives = 170/349 (48%)

Query: 335 VLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKS 394
           ++  +  +V  ++G      I+ PI  +   +  I+ G GDLT  + +  +DE  +L   
Sbjct: 297 IIAAVLAVVFAIVGASFARVIVRPIHSVSSGLEGIAGGEGDLTQNLAVRGKDETAQLAGW 356

Query: 395 FDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAI 454
           F+KF+  I++LI  I Q+      A+   +      AEA  +Q   V+ +S A   M A 
Sbjct: 357 FNKFLTAIRSLIQHIGQAAGKILEASHSSTRVSNDMAEAAGRQREAVDMVSTAFHEMVAT 416

Query: 455 SSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSI 514
           S++V     + + S  N  + A+     +  A +SV++L  E+T+  + +  L+     I
Sbjct: 417 SNEVARSCSQAADSADNGQQQAREGQRQIDDAVRSVDQLSEELTRSAKDMTQLEKDSAGI 476

Query: 515 EPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSI 574
           + +L  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RT  ST  I   +
Sbjct: 477 QSILNTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTSDSTAEIDSLL 536

Query: 575 TQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQE 634
             L        + ++ S+    Q+     QA  S  Q+   +  +  MN Q + A   Q 
Sbjct: 537 GNLAKRTASVAQQMHASLDVSQQSVTKIGQARSSFGQIRESVDVIRDMNTQIATAAEEQH 596

Query: 635 QSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFK 683
           Q    I   +S +    Q   +    +     +L++   +L   + KFK
Sbjct: 597 QVAEDINRHISQIHGDAQLIAQLSDSARADSRSLEMLSSELDGLVRKFK 645