Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  184 bits (466), Expect = 1e-50
 Identities = 115/359 (32%), Positives = 183/359 (50%), Gaps = 3/359 (0%)

Query: 326 QAWAISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQ 385
           Q W    F   I++ +++LL+    +V  I+ P++     +  I+ G  DLT  +     
Sbjct: 188 QLWNAGMFIAGIVLIMVLLLVT---IVRSIVRPLRAAVGAMASIASGESDLTRTLETHGN 244

Query: 386 DEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTIS 445
           DE  ELG  F+ F+ K++N++  +  S      A+ DL +  +       +Q+ +++ ++
Sbjct: 245 DEITELGTHFNAFVAKLRNVVGQLQHSAVALGQASTDLGSDAEQAQSRSEQQSQQMDLVA 304

Query: 446 NATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETIN 505
            A   +T     V   A   +  + + +  AQ    N+  + + +  L + + Q  + + 
Sbjct: 305 TAVNEVTYGVQDVAKNAEHAASEMRDAESQAQQGQINIDNSLRQIEHLSSTIGQAVQVMQ 364

Query: 506 SLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQG 565
           SL +  T I  VL  I+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ 
Sbjct: 365 SLASESTQIGSVLEVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQK 424

Query: 566 STNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQ 625
           ST  IQ  I +L+  +D +V+VI +S      T E  +QA +SL  ++  +  L  +N  
Sbjct: 425 STAEIQSMIERLQKHSDAAVKVIGDSSRSSQLTIEQANQAGQSLTSISQALRNLNSLNAS 484

Query: 626 TSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
            + A   Q   V  I  +++    L QS     +QS      L+   E+L   + +F++
Sbjct: 485 IASATLQQTHVVDDINQNVTQAAQLSQSTALAAEQSTSASLHLRGLSEELNTLLKQFRV 543