Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  179 bits (455), Expect = 3e-49
 Identities = 110/354 (31%), Positives = 185/354 (52%)

Query: 331 SSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGE 390
           SS  V ++IA+ V+ LL  +L+  ++ P+  +   + DI++G GDLT R++I  +DEF  
Sbjct: 273 SSAMVAVLIAVAVIALLLSLLIRALMRPLTDMGRAMQDIAQGEGDLTRRLSIQGKDEFAA 332

Query: 391 LGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTA 450
           LG SF++F+E++   I +++ +T      +  +  +   +    ++Q+   N ++ A   
Sbjct: 333 LGGSFNQFVERVHASIVEVSSATLQVHDLSQRVVNSSNSSIVGFDEQSARTNNVAAAINE 392

Query: 451 MTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNH 510
           + A + ++   A + S         A+     V +   +++ L A+++     I  L   
Sbjct: 393 LGAATQEIARNASDASIQASEARNQAEDGQVVVEKTIHAMSALSAKISDSCTQIEQLNAS 452

Query: 511 VTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTI 570
             +I  +L  I GI++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ S + I
Sbjct: 453 TENIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQTSADEI 512

Query: 571 QQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAI 630
            + I  L+S +  +V  +N S     ++ E+ +QA   L  V   I  +  MNQ  + A 
Sbjct: 513 HKMIGSLQSGSQHAVLNMNESQTSSQESVEVANQAGSRLRDVTRRIGDIDGMNQSVAAAT 572

Query: 631 THQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
             Q   V ++   ++ +  L Q     + ++    +AL  +   L   +  FKI
Sbjct: 573 EEQTAVVETLNIDINQINTLNQQGVANLNETLKDCAALSQQAGRLKQLVDSFKI 626