Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  170 bits (431), Expect = 1e-46
 Identities = 121/390 (31%), Positives = 195/390 (50%), Gaps = 8/390 (2%)

Query: 298 LALLDFIAELEELADSKVEQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILS 357
           L ++D +  +    + +  + AV     Q  A  +  + I ++     ++G  +   I +
Sbjct: 162 LKVMDQLTTIVNSNNRQAGEAAVASDQTQNSAQRNLYIGIGLSFFAAFVMGLFISRAIST 221

Query: 358 PIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAK 417
           PI         I+  +GDLTL +     DE G +  +     + +++ I  I+ + +   
Sbjct: 222 PINTAVTNARRIA--SGDLTLPIASQYHDEAGMMLVALSDMQDNLKSTIGQISSAADQLA 279

Query: 418 TAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQ 477
           +AA +L+A  + ++  + +Q  E+   ++A   MTA   +V   A   S++      +A 
Sbjct: 280 SAAEELNAVTEESSRGLIRQNDEIQQAASAVNEMTAAVEEVARNAMSTSEASRQTSTDAA 339

Query: 478 STLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAI 537
           +     R A  ++N + AE++  T  +  L   V  I  VL  I GIAEQTNLLALNAAI
Sbjct: 340 AGRDQARDAVNAINTVSAEISSSTTMVEELAGRVREIGQVLDVIRGIAEQTNLLALNAAI 399

Query: 538 EAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNS--MLKG 595
           EAARAGEQGRGFAVVADEVR+LA RTQ ST  I+  I  +++SAD++VR + NS  +   
Sbjct: 400 EAARAGEQGRGFAVVADEVRALAARTQASTGEIETMIGSVQASADQAVRAMANSRTLTSN 459

Query: 596 TQT-TEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSA 654
           TQT  + T Q+ E + Q   EI+    +    SE  +H  + V     ++  L A   + 
Sbjct: 460 TQTLAQATGQSLERIAQSVAEINDRNMLIATASEEQSHVAREVDRNLVNIQDLSAQTAAG 519

Query: 655 QEKIQQSEHTISALKLKQEDLALKMSKFKI 684
             +   S   +S L +   +L   + KFK+
Sbjct: 520 AHQTSASSQELSRLAISFNNL---VGKFKV 546