Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  195 bits (495), Expect = 6e-54
 Identities = 146/479 (30%), Positives = 234/479 (48%), Gaps = 23/479 (4%)

Query: 225 IKAIEQAIGFQKQANSEMFSTGRFTISAGEEWK---NASYEEVFSQLN----------SQ 271
           I A    +G  K      F    +T S   +++   N + ++  + +N          S 
Sbjct: 164 ILAFNGIVGVSKLIQQARFQVRGYTYSGRPDFEKDANKAIDDAVTGINTLAGDISSTYSP 223

Query: 272 HEQAMMAVIESYRNYRQIYQEYTVTSLALLDFIAEL--EELADSK--VEQQAVLILDGQA 327
             Q  +A +  YR     Y++    S A LD +  L    LA S   + +Q        A
Sbjct: 224 MLQQAIAGLNGYRAAVGKYRDAQAASKAALDKMTTLGVSMLATSNDLITRQNKSRDADSA 283

Query: 328 WAISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDE 387
            ++        +A+++ +L  W++  QI +P+Q   E V  ++  +GDL+  +N+  +DE
Sbjct: 284 KSVQMIIAATALAMVLGILAAWVITRQITTPLQETLEVVERVA--SGDLSRNLNVDRKDE 341

Query: 388 FGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNA 447
            G+L  +  +    ++ L+  I        +AA +LSA  + T+  VN Q  E + ++ A
Sbjct: 342 LGKLQATIQRMTVSLRELVGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATA 401

Query: 448 TTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSL 507
              MTA   +V   A E S++ +  D+ A+     V +A   +  L + V   +E + +L
Sbjct: 402 MHEMTATVQEVARNAEEASEAAVAADRQARDGERVVNEAIAQIERLASAVGNSSEAMGAL 461

Query: 508 KNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGST 567
           K     I  VL  I  +AEQTNLLALNAAIEAARAGE GRGFAVVADEVRSLA RTQ ST
Sbjct: 462 KQESDKIGSVLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKST 521

Query: 568 NTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTS 627
             I+  I +L+S   ++  V+++S    T + E+T +A  SL  +   +S +  MNQQ +
Sbjct: 522 EEIEALIARLQSGTQQATTVMDSSRELSTSSVELTRRAGGSLANITKTVSSIQAMNQQIA 581

Query: 628 EAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQ--EDLALKMSKFKI 684
            A   +EQS T+   + S +     S Q      E   S+++L +    L + +S+F +
Sbjct: 582 AAA--EEQSATAEEINRSIINVRDVSEQTSAASEETAASSVELARLGNHLQVLVSRFTV 638