Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  204 bits (520), Expect = 7e-57
 Identities = 112/356 (31%), Positives = 197/356 (55%), Gaps = 1/356 (0%)

Query: 329 AISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEF 388
           A++ F + +++A + L+ + W   ++++ PI+ + + + DI++G GDLT R+++  +DE 
Sbjct: 204 AVAIFMMSLVLAFITLIAI-WSAAHRMVKPIRAMVDSLNDIAKGEGDLTARLSVRGEDEI 262

Query: 389 GELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNAT 448
            ELG +F++F++K+Q +I D+  +T   K AAVD+       A  +N    E + +  A 
Sbjct: 263 AELGIAFNQFVDKLQGIIRDVADTTGRVKQAAVDIDRQTSEMANQLNSHNNETDQVVTAI 322

Query: 449 TAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLK 508
           T M++ +++V     +++++      +     + V  +   ++ L+++V      I SL 
Sbjct: 323 TEMSSTAAEVAQNTTQVAEATQAATGDVAKAQACVDTSLAEISNLMSQVNDAAANIQSLS 382

Query: 509 NHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTN 568
                I  VL+ I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ ST 
Sbjct: 383 EQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQASTL 442

Query: 569 TIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSE 628
            I + +T L      +V+ ++ S     ++ E ++   ESL  V   ++ +  M+ Q + 
Sbjct: 443 EINEMLTDLHRLVSSAVKTMDESQHSCQRSVEASTAISESLGSVTSAVTAINDMSTQIAA 502

Query: 629 AITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
           A T Q      I  ++  +Q +  +     Q++      +  +   L+  + +FK+
Sbjct: 503 AATEQSSVTEEINRNVYAIQEIVNALLVSSQEARTVSRTVSTEGAQLSNLVGQFKV 558