Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  186 bits (473), Expect = 2e-51
 Identities = 111/353 (31%), Positives = 194/353 (54%), Gaps = 8/353 (2%)

Query: 335 VLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKS 394
           +L++IA++V +++ + +V  +   +  +   +  ++  +GDLT +++ T  DEF EL ++
Sbjct: 326 ILVVIAIVVAVVISFAVVRPLKRSLDEVNGALNVLA--SGDLTHKLDDTGHDEFAELSRN 383

Query: 395 FDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAI 454
            ++ ++ +++LIA I   +N    AA + SA    T   + +Q  +V+ ++ ATT +++ 
Sbjct: 384 CNRLVDSLRSLIASILDRSNQLAAAAEETSAITSQTTIGIQEQKSQVDQVATATTELSSS 443

Query: 455 SSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSI 514
           + QV   A +    +   D+  Q   +   +  +++  L  EV + ++ IN + +   SI
Sbjct: 444 AHQVNMSADDALSQIKQADEETQHMRTIADENKRTILSLADEVAKASKVINKVHSDSASI 503

Query: 515 EPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSI 574
             +L  I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA+RTQ ST  IQQ I
Sbjct: 504 GSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQDSTREIQQMI 563

Query: 575 TQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQE 634
             L+    ++V V+     +     E T QA ++L  ++  + +        ++A   Q 
Sbjct: 564 EVLQQGTQQAVAVMQLGQNQAQSCVEKTEQANQALQTISHSVHKAYDAGTHIAQAAQEQN 623

Query: 635 QSVTSIASSLSHLQALCQS---AQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
                ++  L H+ A+ +      E+  +S H ++ L    E+L   + +F++
Sbjct: 624 LVSQQVSEKLEHIAAISEETALGAEQTAKSSHEVARL---AEELQSSVKEFRV 673