Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  175 bits (444), Expect = 5e-48
 Identities = 111/379 (29%), Positives = 193/379 (50%), Gaps = 8/379 (2%)

Query: 306 ELEELADSKVEQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQER 365
           EL ELA  ++  +     D  A A + F V+ ++  +V  ++    +  I++PI  + + 
Sbjct: 250 ELRELALHEIHDEEG---DSVAMATTLFAVIAVLVAIVTFMI----IRAIITPINNINQV 302

Query: 366 VTDISEGNGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSA 425
           ++ + +   +LTLR +    DE  E+G+ F++ +E  + LI  +  + N+   +  +LSA
Sbjct: 303 ISHVGKDK-NLTLRCDTQGGDEIAEIGQHFNEMVESFRALIQQVNDAVNVMNESCQELSA 361

Query: 426 TFKVTAEAVNKQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQ 485
                ++ V +Q  E + ++ A T M A   ++       ++   +   NAQ    +V Q
Sbjct: 362 NATQASDGVLRQLNETDMVATAITEMGATIDEIAKNTELAAERANHTHTNAQVGQQSVEQ 421

Query: 486 AAQSVNELVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQ 545
             + +  L  ++      +  L+    +I  VL  I GIAEQTNLLALNAAIEAARAGEQ
Sbjct: 422 TIEKIQSLAQQLNNSASVVAELERDSGTIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQ 481

Query: 546 GRGFAVVADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQA 605
           GRGFAVVADEVRSLA RTQ ST  I   I  L+S     V+++  S  +G ++ E  + A
Sbjct: 482 GRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEASQRQGGESAEQAASA 541

Query: 606 EESLHQVAIEISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTI 665
              L Q+  +++ +  M+ Q + AI  Q      +  ++  ++ + + +      +    
Sbjct: 542 GTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAAEVNKNVVVIRDIAEESSHAAMANAKAS 601

Query: 666 SALKLKQEDLALKMSKFKI 684
             ++ + E L   +S+F++
Sbjct: 602 DDVRERAEYLQRAVSQFRV 620